Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.15■□□□□ 0.82
NANOGQ9H9S0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NANOGQ9H9S0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
NANOGQ9H9S0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NANOGQ9H9S0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NANOGQ9H9S0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NANOGQ9H9S0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NANOGQ9H9S0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
NANOGQ9H9S0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NANOGQ9H9S0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NANOGQ9H9S0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.15■□□□□ 0.82
NANOGQ9H9S0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.14■□□□□ 0.82
NANOGQ9H9S0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
NANOGQ9H9S0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NANOGQ9H9S0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.14■□□□□ 0.81
NANOGQ9H9S0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NANOGQ9H9S0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NANOGQ9H9S0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NANOGQ9H9S0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NANOGQ9H9S0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NANOGQ9H9S0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.14■□□□□ 0.81
NANOGQ9H9S0 UNC93B8-201ENST00000511903 705 ntBASIC20.14■□□□□ 0.81
NANOGQ9H9S0 AC099791.2-201ENST00000605725 427 ntBASIC20.14■□□□□ 0.81
NANOGQ9H9S0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NANOGQ9H9S0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.14■□□□□ 0.81
NANOGQ9H9S0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NANOGQ9H9S0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
NANOGQ9H9S0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NANOGQ9H9S0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.14■□□□□ 0.81
NANOGQ9H9S0 FEM1AP1-201ENST00000431297 1995 ntBASIC20.14■□□□□ 0.81
NANOGQ9H9S0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.14■□□□□ 0.81
NANOGQ9H9S0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NANOGQ9H9S0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
NANOGQ9H9S0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NANOGQ9H9S0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.12■□□□□ 0.81
NANOGQ9H9S0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
NANOGQ9H9S0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NANOGQ9H9S0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NANOGQ9H9S0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.12■□□□□ 0.81
NANOGQ9H9S0 OR2I1P-207ENST00000453522 948 ntBASIC20.12■□□□□ 0.81
NANOGQ9H9S0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.12■□□□□ 0.81
NANOGQ9H9S0 AC010141.3-201ENST00000456659 717 ntBASIC20.12■□□□□ 0.81
NANOGQ9H9S0 AC009299.2-201ENST00000482477 511 ntBASIC20.12■□□□□ 0.81
NANOGQ9H9S0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.12■□□□□ 0.81
NANOGQ9H9S0 MIR3181-201ENST00000578512 73 ntBASIC20.12■□□□□ 0.81
NANOGQ9H9S0 AC087239.1-201ENST00000622671 572 ntBASIC20.12■□□□□ 0.81
NANOGQ9H9S0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NANOGQ9H9S0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.12■□□□□ 0.81
NANOGQ9H9S0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
NANOGQ9H9S0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NANOGQ9H9S0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NANOGQ9H9S0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.11■□□□□ 0.81
NANOGQ9H9S0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.11■□□□□ 0.81
NANOGQ9H9S0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NANOGQ9H9S0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.11■□□□□ 0.81
NANOGQ9H9S0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NANOGQ9H9S0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NANOGQ9H9S0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NANOGQ9H9S0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NANOGQ9H9S0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NANOGQ9H9S0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NANOGQ9H9S0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
NANOGQ9H9S0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NANOGQ9H9S0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NANOGQ9H9S0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NANOGQ9H9S0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.11■□□□□ 0.81
NANOGQ9H9S0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NANOGQ9H9S0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NANOGQ9H9S0 AC003102.1-202ENST00000563394 1796 ntBASIC20.11■□□□□ 0.81
NANOGQ9H9S0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.1■□□□□ 0.81
NANOGQ9H9S0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NANOGQ9H9S0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NANOGQ9H9S0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NANOGQ9H9S0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NANOGQ9H9S0 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.1■□□□□ 0.81
NANOGQ9H9S0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.1■□□□□ 0.81
NANOGQ9H9S0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms