Protein–RNA interactions for Protein: Q9H467

CUEDC2, CUE domain-containing protein 2, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2Q9H467 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CUEDC2Q9H467 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CUEDC2Q9H467 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.76■■□□□ 1.39
CUEDC2Q9H467 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CUEDC2Q9H467 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.76■■□□□ 1.39
CUEDC2Q9H467 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.76■■□□□ 1.39
CUEDC2Q9H467 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.76■■□□□ 1.39
CUEDC2Q9H467 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CUEDC2Q9H467 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CUEDC2Q9H467 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CUEDC2Q9H467 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CUEDC2Q9H467 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.76■■□□□ 1.39
CUEDC2Q9H467 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.76■■□□□ 1.39
CUEDC2Q9H467 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CUEDC2Q9H467 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CUEDC2Q9H467 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CUEDC2Q9H467 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.75■■□□□ 1.39
CUEDC2Q9H467 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CUEDC2Q9H467 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CUEDC2Q9H467 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
CUEDC2Q9H467 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
CUEDC2Q9H467 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CUEDC2Q9H467 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.75■■□□□ 1.39
CUEDC2Q9H467 AL354811.1-201ENST00000610286 706 ntBASIC23.75■■□□□ 1.39
CUEDC2Q9H467 AC005837.3-201ENST00000612163 286 ntBASIC23.75■■□□□ 1.39
CUEDC2Q9H467 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.75■■□□□ 1.39
CUEDC2Q9H467 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CUEDC2Q9H467 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.75■■□□□ 1.39
CUEDC2Q9H467 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CUEDC2Q9H467 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CUEDC2Q9H467 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CUEDC2Q9H467 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.74■■□□□ 1.39
CUEDC2Q9H467 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CUEDC2Q9H467 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.74■■□□□ 1.39
CUEDC2Q9H467 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.74■■□□□ 1.39
CUEDC2Q9H467 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.74■■□□□ 1.39
CUEDC2Q9H467 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CUEDC2Q9H467 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CUEDC2Q9H467 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CUEDC2Q9H467 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CUEDC2Q9H467 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CUEDC2Q9H467 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CUEDC2Q9H467 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.73■■□□□ 1.39
CUEDC2Q9H467 AL358852.1-201ENST00000623174 1268 ntBASIC23.73■■□□□ 1.39
CUEDC2Q9H467 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CUEDC2Q9H467 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.73■■□□□ 1.39
CUEDC2Q9H467 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CUEDC2Q9H467 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
CUEDC2Q9H467 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CUEDC2Q9H467 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CUEDC2Q9H467 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CUEDC2Q9H467 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CUEDC2Q9H467 FEM1AP4-201ENST00000443167 1987 ntBASIC23.72■■□□□ 1.39
CUEDC2Q9H467 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.72■■□□□ 1.39
CUEDC2Q9H467 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.72■■□□□ 1.39
CUEDC2Q9H467 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CUEDC2Q9H467 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CUEDC2Q9H467 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CUEDC2Q9H467 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CUEDC2Q9H467 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CUEDC2Q9H467 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.72■■□□□ 1.39
CUEDC2Q9H467 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
CUEDC2Q9H467 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
CUEDC2Q9H467 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
CUEDC2Q9H467 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CUEDC2Q9H467 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.71■■□□□ 1.39
CUEDC2Q9H467 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CUEDC2Q9H467 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
CUEDC2Q9H467 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
CUEDC2Q9H467 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.7■■□□□ 1.39
CUEDC2Q9H467 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.7■■□□□ 1.39
CUEDC2Q9H467 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
CUEDC2Q9H467 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.7■■□□□ 1.38
CUEDC2Q9H467 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CUEDC2Q9H467 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CUEDC2Q9H467 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms