Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 SUDS3P1-201ENST00000505831 966 ntBASIC23.01■■□□□ 1.27
NUCKS1Q9H1E3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.01■■□□□ 1.27
NUCKS1Q9H1E3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
NUCKS1Q9H1E3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
NUCKS1Q9H1E3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NUCKS1Q9H1E3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23■■□□□ 1.27
NUCKS1Q9H1E3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
NUCKS1Q9H1E3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NUCKS1Q9H1E3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
NUCKS1Q9H1E3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NUCKS1Q9H1E3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23■■□□□ 1.27
NUCKS1Q9H1E3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23■■□□□ 1.27
NUCKS1Q9H1E3 AP001330.3-201ENST00000520123 633 ntBASIC23■■□□□ 1.27
NUCKS1Q9H1E3 AC142381.2-201ENST00000566120 298 ntBASIC23■■□□□ 1.27
NUCKS1Q9H1E3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NUCKS1Q9H1E3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
NUCKS1Q9H1E3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NUCKS1Q9H1E3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NUCKS1Q9H1E3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NUCKS1Q9H1E3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NUCKS1Q9H1E3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
NUCKS1Q9H1E3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
NUCKS1Q9H1E3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NUCKS1Q9H1E3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
NUCKS1Q9H1E3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NUCKS1Q9H1E3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.99■■□□□ 1.27
NUCKS1Q9H1E3 AF213884.3-201ENST00000563833 479 ntBASIC22.99■■□□□ 1.27
NUCKS1Q9H1E3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.99■■□□□ 1.27
NUCKS1Q9H1E3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.99■■□□□ 1.27
NUCKS1Q9H1E3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NUCKS1Q9H1E3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NUCKS1Q9H1E3 AP004607.7-201ENST00000527152 1677 ntBASIC22.99■■□□□ 1.27
NUCKS1Q9H1E3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.98■■□□□ 1.27
NUCKS1Q9H1E3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NUCKS1Q9H1E3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.98■■□□□ 1.27
NUCKS1Q9H1E3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NUCKS1Q9H1E3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NUCKS1Q9H1E3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NUCKS1Q9H1E3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
NUCKS1Q9H1E3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NUCKS1Q9H1E3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NUCKS1Q9H1E3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
NUCKS1Q9H1E3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NUCKS1Q9H1E3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NUCKS1Q9H1E3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
NUCKS1Q9H1E3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NUCKS1Q9H1E3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
NUCKS1Q9H1E3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NUCKS1Q9H1E3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NUCKS1Q9H1E3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.97■■□□□ 1.27
NUCKS1Q9H1E3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
NUCKS1Q9H1E3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NUCKS1Q9H1E3 MIR939-201ENST00000401314 82 ntBASIC22.97■■□□□ 1.27
NUCKS1Q9H1E3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
NUCKS1Q9H1E3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
NUCKS1Q9H1E3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NUCKS1Q9H1E3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
NUCKS1Q9H1E3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
NUCKS1Q9H1E3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NUCKS1Q9H1E3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NUCKS1Q9H1E3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NUCKS1Q9H1E3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NUCKS1Q9H1E3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
NUCKS1Q9H1E3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
NUCKS1Q9H1E3 AF106564.1-201ENST00000607058 2553 ntBASIC22.96■■□□□ 1.27
NUCKS1Q9H1E3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NUCKS1Q9H1E3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NUCKS1Q9H1E3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
NUCKS1Q9H1E3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.96■■□□□ 1.27
NUCKS1Q9H1E3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.96■■□□□ 1.27
NUCKS1Q9H1E3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.96■■□□□ 1.27
NUCKS1Q9H1E3 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.96■■□□□ 1.27
NUCKS1Q9H1E3 AL136967.2-201ENST00000623968 743 ntBASIC22.96■■□□□ 1.27
NUCKS1Q9H1E3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NUCKS1Q9H1E3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NUCKS1Q9H1E3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.96■■□□□ 1.27
NUCKS1Q9H1E3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
NUCKS1Q9H1E3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NUCKS1Q9H1E3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.95■■□□□ 1.27
NUCKS1Q9H1E3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
NUCKS1Q9H1E3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
NUCKS1Q9H1E3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC22.95■■□□□ 1.26
NUCKS1Q9H1E3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
NUCKS1Q9H1E3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.95■■□□□ 1.26
NUCKS1Q9H1E3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
NUCKS1Q9H1E3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
NUCKS1Q9H1E3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
NUCKS1Q9H1E3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
NUCKS1Q9H1E3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
NUCKS1Q9H1E3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.94■■□□□ 1.26
NUCKS1Q9H1E3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NUCKS1Q9H1E3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NUCKS1Q9H1E3 AC003102.1-202ENST00000563394 1796 ntBASIC22.94■■□□□ 1.26
NUCKS1Q9H1E3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.94■■□□□ 1.26
NUCKS1Q9H1E3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NUCKS1Q9H1E3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
NUCKS1Q9H1E3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
NUCKS1Q9H1E3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.94■■□□□ 1.26
NUCKS1Q9H1E3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
NUCKS1Q9H1E3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms