Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC126544.1-201ENST00000580842 1059 ntBASIC19.54■□□□□ 0.72
TRIM2Q9C040 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.54■□□□□ 0.72
TRIM2Q9C040 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM2Q9C040 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM2Q9C040 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM2Q9C040 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM2Q9C040 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM2Q9C040 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM2Q9C040 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM2Q9C040 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM2Q9C040 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TRIM2Q9C040 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM2Q9C040 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM2Q9C040 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM2Q9C040 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM2Q9C040 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM2Q9C040 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM2Q9C040 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.53■□□□□ 0.72
TRIM2Q9C040 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM2Q9C040 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM2Q9C040 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM2Q9C040 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM2Q9C040 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.53■□□□□ 0.72
TRIM2Q9C040 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM2Q9C040 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM2Q9C040 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM2Q9C040 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM2Q9C040 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TRIM2Q9C040 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM2Q9C040 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TRIM2Q9C040 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM2Q9C040 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM2Q9C040 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM2Q9C040 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM2Q9C040 Z98882.1-201ENST00000622160 2253 ntBASIC19.52■□□□□ 0.72
TRIM2Q9C040 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.52■□□□□ 0.72
TRIM2Q9C040 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TRIM2Q9C040 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.52■□□□□ 0.72
TRIM2Q9C040 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM2Q9C040 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.52■□□□□ 0.72
TRIM2Q9C040 AL136967.2-201ENST00000623968 743 ntBASIC19.52■□□□□ 0.72
TRIM2Q9C040 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM2Q9C040 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM2Q9C040 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TRIM2Q9C040 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.52■□□□□ 0.71
TRIM2Q9C040 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.52■□□□□ 0.71
TRIM2Q9C040 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.52■□□□□ 0.71
TRIM2Q9C040 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM2Q9C040 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM2Q9C040 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.52■□□□□ 0.71
TRIM2Q9C040 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TRIM2Q9C040 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM2Q9C040 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.51■□□□□ 0.71
TRIM2Q9C040 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM2Q9C040 MIR939-201ENST00000401314 82 ntBASIC19.51■□□□□ 0.71
TRIM2Q9C040 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM2Q9C040 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM2Q9C040 AF213884.3-201ENST00000563833 479 ntBASIC19.51■□□□□ 0.71
TRIM2Q9C040 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM2Q9C040 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM2Q9C040 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM2Q9C040 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM2Q9C040 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM2Q9C040 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TRIM2Q9C040 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM2Q9C040 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM2Q9C040 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM2Q9C040 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TRIM2Q9C040 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM2Q9C040 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM2Q9C040 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM2Q9C040 AP001330.3-201ENST00000520123 633 ntBASIC19.5■□□□□ 0.71
TRIM2Q9C040 IGHV3-19-201ENST00000521488 291 ntBASIC19.5■□□□□ 0.71
TRIM2Q9C040 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TRIM2Q9C040 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.5■□□□□ 0.71
TRIM2Q9C040 SMUG1P1-201ENST00000590640 811 ntBASIC19.5■□□□□ 0.71
TRIM2Q9C040 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM2Q9C040 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM2Q9C040 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TRIM2Q9C040 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM2Q9C040 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TRIM2Q9C040 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM2Q9C040 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM2Q9C040 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM2Q9C040 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM2Q9C040 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM2Q9C040 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM2Q9C040 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM2Q9C040 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM2Q9C040 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TRIM2Q9C040 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM2Q9C040 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
TRIM2Q9C040 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM2Q9C040 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM2Q9C040 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM2Q9C040 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM2Q9C040 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM2Q9C040 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRIM2Q9C040 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM2Q9C040 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms