Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AC104771.1-201ENST00000603335 964 ntBASIC7.26□□□□□ -1.25
KRTAP4-3Q9BYR4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC7.26□□□□□ -1.25
KRTAP4-3Q9BYR4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC7.26□□□□□ -1.25
KRTAP4-3Q9BYR4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC7.26□□□□□ -1.25
KRTAP4-3Q9BYR4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
KRTAP4-3Q9BYR4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
KRTAP4-3Q9BYR4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
KRTAP4-3Q9BYR4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
KRTAP4-3Q9BYR4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC7.26□□□□□ -1.25
KRTAP4-3Q9BYR4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
KRTAP4-3Q9BYR4 AP006587.3-201ENST00000525742 1516 ntBASIC7.26□□□□□ -1.25
KRTAP4-3Q9BYR4 AC068473.5-201ENST00000616428 2072 ntBASIC7.26□□□□□ -1.25
KRTAP4-3Q9BYR4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
KRTAP4-3Q9BYR4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
KRTAP4-3Q9BYR4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC7.26□□□□□ -1.25
KRTAP4-3Q9BYR4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC7.26□□□□□ -1.25
KRTAP4-3Q9BYR4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 AC006970.2-201ENST00000450065 779 ntBASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
KRTAP4-3Q9BYR4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 CNN2P6-201ENST00000439038 900 ntBASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 AL138781.1-201ENST00000566567 1274 ntBASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 AL109923.1-201ENST00000618799 583 ntBASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
KRTAP4-3Q9BYR4 EP400NL-214ENST00000641289 2402 ntBASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 AC003102.1-202ENST00000563394 1796 ntBASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms