Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 LINC01960-201ENST00000563759 1884 ntBASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 AC011551.1-201ENST00000614101 683 ntBASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 AF106564.1-201ENST00000607058 2553 ntBASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 LINC01006-201ENST00000333319 2292 ntBASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC5.73□□□□□ -1.49
LCE3DQ9BYE3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 AC007952.6-201ENST00000573168 2673 ntBASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 AC003957.1-201ENST00000625108 2673 ntBASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC5.72□□□□□ -1.49
LCE3DQ9BYE3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms