Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSBP3Q9BWW4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSBP3Q9BWW4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSBP3Q9BWW4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSBP3Q9BWW4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSBP3Q9BWW4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.71■□□□□ 0.43
SSBP3Q9BWW4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSBP3Q9BWW4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSBP3Q9BWW4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSBP3Q9BWW4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSBP3Q9BWW4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSBP3Q9BWW4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSBP3Q9BWW4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.71■□□□□ 0.43
SSBP3Q9BWW4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.71■□□□□ 0.43
SSBP3Q9BWW4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.71■□□□□ 0.43
SSBP3Q9BWW4 AC104187.1-201ENST00000607510 612 ntBASIC17.71■□□□□ 0.43
SSBP3Q9BWW4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.71■□□□□ 0.43
SSBP3Q9BWW4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSBP3Q9BWW4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSBP3Q9BWW4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSBP3Q9BWW4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSBP3Q9BWW4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSBP3Q9BWW4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SSBP3Q9BWW4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSBP3Q9BWW4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSBP3Q9BWW4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSBP3Q9BWW4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SSBP3Q9BWW4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.7■□□□□ 0.42
SSBP3Q9BWW4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SSBP3Q9BWW4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.7■□□□□ 0.42
SSBP3Q9BWW4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.7■□□□□ 0.42
SSBP3Q9BWW4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.7■□□□□ 0.42
SSBP3Q9BWW4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSBP3Q9BWW4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SSBP3Q9BWW4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSBP3Q9BWW4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSBP3Q9BWW4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SSBP3Q9BWW4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSBP3Q9BWW4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSBP3Q9BWW4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.69■□□□□ 0.42
SSBP3Q9BWW4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSBP3Q9BWW4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SSBP3Q9BWW4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.69■□□□□ 0.42
SSBP3Q9BWW4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SSBP3Q9BWW4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSBP3Q9BWW4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.69■□□□□ 0.42
SSBP3Q9BWW4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSBP3Q9BWW4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSBP3Q9BWW4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSBP3Q9BWW4 AC006015.1-201ENST00000429970 570 ntBASIC17.69■□□□□ 0.42
SSBP3Q9BWW4 KRT18P11-201ENST00000435214 1283 ntBASIC17.69■□□□□ 0.42
SSBP3Q9BWW4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSBP3Q9BWW4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSBP3Q9BWW4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSBP3Q9BWW4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSBP3Q9BWW4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSBP3Q9BWW4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.68■□□□□ 0.42
SSBP3Q9BWW4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.68■□□□□ 0.42
SSBP3Q9BWW4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.68■□□□□ 0.42
SSBP3Q9BWW4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSBP3Q9BWW4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SSBP3Q9BWW4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSBP3Q9BWW4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSBP3Q9BWW4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSBP3Q9BWW4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSBP3Q9BWW4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.68■□□□□ 0.42
SSBP3Q9BWW4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SSBP3Q9BWW4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSBP3Q9BWW4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSBP3Q9BWW4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.68■□□□□ 0.42
SSBP3Q9BWW4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSBP3Q9BWW4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.68■□□□□ 0.42
SSBP3Q9BWW4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSBP3Q9BWW4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SSBP3Q9BWW4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSBP3Q9BWW4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.68■□□□□ 0.42
SSBP3Q9BWW4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.68■□□□□ 0.42
SSBP3Q9BWW4 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.67■□□□□ 0.42
SSBP3Q9BWW4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.67■□□□□ 0.42
SSBP3Q9BWW4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SSBP3Q9BWW4 AL117328.2-201ENST00000624617 1940 ntBASIC17.67■□□□□ 0.42
SSBP3Q9BWW4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSBP3Q9BWW4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.67■□□□□ 0.42
SSBP3Q9BWW4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSBP3Q9BWW4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.67■□□□□ 0.42
SSBP3Q9BWW4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
SSBP3Q9BWW4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.67■□□□□ 0.42
SSBP3Q9BWW4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.67■□□□□ 0.42
SSBP3Q9BWW4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.67■□□□□ 0.42
SSBP3Q9BWW4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SSBP3Q9BWW4 RARRES2P11-201ENST00000635158 484 ntBASIC17.67■□□□□ 0.42
SSBP3Q9BWW4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SSBP3Q9BWW4 AC080038.3-201ENST00000623346 1952 ntBASIC17.67■□□□□ 0.42
SSBP3Q9BWW4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSBP3Q9BWW4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.67■□□□□ 0.42
SSBP3Q9BWW4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.67■□□□□ 0.42
SSBP3Q9BWW4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SSBP3Q9BWW4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.67■□□□□ 0.42
SSBP3Q9BWW4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSBP3Q9BWW4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms