Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
KLHDC3Q9BQ90 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KLHDC3Q9BQ90 TERF1P2-201ENST00000583350 1212 ntBASIC19.39■□□□□ 0.69
KLHDC3Q9BQ90 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.39■□□□□ 0.69
KLHDC3Q9BQ90 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KLHDC3Q9BQ90 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
KLHDC3Q9BQ90 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
KLHDC3Q9BQ90 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.39■□□□□ 0.69
KLHDC3Q9BQ90 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KLHDC3Q9BQ90 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KLHDC3Q9BQ90 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
KLHDC3Q9BQ90 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KLHDC3Q9BQ90 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KLHDC3Q9BQ90 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
KLHDC3Q9BQ90 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KLHDC3Q9BQ90 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KLHDC3Q9BQ90 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
KLHDC3Q9BQ90 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KLHDC3Q9BQ90 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.38■□□□□ 0.69
KLHDC3Q9BQ90 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.38■□□□□ 0.69
KLHDC3Q9BQ90 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
KLHDC3Q9BQ90 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 AC123595.1-201ENST00000440769 1046 ntBASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 DUX4L2-201ENST00000561772 1275 ntBASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 DUX4L6-201ENST00000626483 1275 ntBASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 DUX4L1-201ENST00000627662 1275 ntBASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 DUX4L8-201ENST00000629013 1275 ntBASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 DUX4L3-201ENST00000630187 1275 ntBASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 DUX4L7-201ENST00000630678 1275 ntBASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 DUX4L5-201ENST00000630834 1275 ntBASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KLHDC3Q9BQ90 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
KLHDC3Q9BQ90 CLDN5-201ENST00000403084 2357 ntBASIC19.36■□□□□ 0.69
KLHDC3Q9BQ90 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
KLHDC3Q9BQ90 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KLHDC3Q9BQ90 LINC02228-203ENST00000641970 1355 ntBASIC19.36■□□□□ 0.69
KLHDC3Q9BQ90 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KLHDC3Q9BQ90 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.36■□□□□ 0.69
KLHDC3Q9BQ90 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.36■□□□□ 0.69
KLHDC3Q9BQ90 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.36■□□□□ 0.69
KLHDC3Q9BQ90 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.36■□□□□ 0.69
KLHDC3Q9BQ90 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
KLHDC3Q9BQ90 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
KLHDC3Q9BQ90 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KLHDC3Q9BQ90 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KLHDC3Q9BQ90 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
KLHDC3Q9BQ90 AC026310.3-201ENST00000625186 2373 ntBASIC19.35■□□□□ 0.69
KLHDC3Q9BQ90 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.35■□□□□ 0.69
KLHDC3Q9BQ90 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KLHDC3Q9BQ90 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KLHDC3Q9BQ90 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KLHDC3Q9BQ90 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KLHDC3Q9BQ90 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
KLHDC3Q9BQ90 AC097381.1-201ENST00000429019 1296 ntBASIC19.35■□□□□ 0.69
KLHDC3Q9BQ90 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KLHDC3Q9BQ90 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.35■□□□□ 0.69
KLHDC3Q9BQ90 RARRES2P6-201ENST00000567333 442 ntBASIC19.35■□□□□ 0.69
KLHDC3Q9BQ90 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.35■□□□□ 0.69
KLHDC3Q9BQ90 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KLHDC3Q9BQ90 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KLHDC3Q9BQ90 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
KLHDC3Q9BQ90 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KLHDC3Q9BQ90 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KLHDC3Q9BQ90 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
KLHDC3Q9BQ90 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KLHDC3Q9BQ90 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KLHDC3Q9BQ90 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.34■□□□□ 0.69
KLHDC3Q9BQ90 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.34■□□□□ 0.69
KLHDC3Q9BQ90 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.34■□□□□ 0.69
KLHDC3Q9BQ90 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.34■□□□□ 0.69
KLHDC3Q9BQ90 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KLHDC3Q9BQ90 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KLHDC3Q9BQ90 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
KLHDC3Q9BQ90 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.34■□□□□ 0.69
KLHDC3Q9BQ90 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.34■□□□□ 0.69
KLHDC3Q9BQ90 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
KLHDC3Q9BQ90 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.34■□□□□ 0.69
KLHDC3Q9BQ90 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
KLHDC3Q9BQ90 KRT18P14-201ENST00000534205 1250 ntBASIC19.34■□□□□ 0.69
KLHDC3Q9BQ90 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms