Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LITAFQ99732 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LITAFQ99732 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LITAFQ99732 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LITAFQ99732 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
LITAFQ99732 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC14.2□□□□□ -0.14
LITAFQ99732 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LITAFQ99732 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC14.2□□□□□ -0.14
LITAFQ99732 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LITAFQ99732 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LITAFQ99732 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LITAFQ99732 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
LITAFQ99732 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LITAFQ99732 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.2□□□□□ -0.14
LITAFQ99732 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LITAFQ99732 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC14.19□□□□□ -0.14
LITAFQ99732 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LITAFQ99732 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
LITAFQ99732 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LITAFQ99732 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LITAFQ99732 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LITAFQ99732 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LITAFQ99732 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LITAFQ99732 AL592293.1-201ENST00000502889 1188 ntBASIC14.19□□□□□ -0.14
LITAFQ99732 AC022616.5-201ENST00000518796 181 ntBASIC14.19□□□□□ -0.14
LITAFQ99732 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC14.19□□□□□ -0.14
LITAFQ99732 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LITAFQ99732 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LITAFQ99732 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LITAFQ99732 AC018445.3-201ENST00000624177 1945 ntBASIC14.19□□□□□ -0.14
LITAFQ99732 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.19□□□□□ -0.14
LITAFQ99732 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.19□□□□□ -0.14
LITAFQ99732 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LITAFQ99732 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LITAFQ99732 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LITAFQ99732 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LITAFQ99732 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC14.18□□□□□ -0.14
LITAFQ99732 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LITAFQ99732 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.18□□□□□ -0.14
LITAFQ99732 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LITAFQ99732 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LITAFQ99732 BX323043.1-201ENST00000641006 1765 ntBASIC14.18□□□□□ -0.14
LITAFQ99732 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LITAFQ99732 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LITAFQ99732 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LITAFQ99732 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
LITAFQ99732 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.18□□□□□ -0.14
LITAFQ99732 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.18□□□□□ -0.14
LITAFQ99732 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LITAFQ99732 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LITAFQ99732 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LITAFQ99732 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.17□□□□□ -0.14
LITAFQ99732 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC14.17□□□□□ -0.14
LITAFQ99732 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LITAFQ99732 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LITAFQ99732 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LITAFQ99732 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC14.17□□□□□ -0.14
LITAFQ99732 AC027702.1-201ENST00000563810 1770 ntBASIC14.17□□□□□ -0.14
LITAFQ99732 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LITAFQ99732 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LITAFQ99732 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LITAFQ99732 DUX4L9-201ENST00000449051 1259 ntBASIC14.17□□□□□ -0.14
LITAFQ99732 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LITAFQ99732 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LITAFQ99732 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LITAFQ99732 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LITAFQ99732 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.17□□□□□ -0.14
LITAFQ99732 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LITAFQ99732 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LITAFQ99732 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LITAFQ99732 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LITAFQ99732 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LITAFQ99732 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LITAFQ99732 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LITAFQ99732 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
LITAFQ99732 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LITAFQ99732 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC14.16□□□□□ -0.14
LITAFQ99732 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC14.16□□□□□ -0.14
LITAFQ99732 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LITAFQ99732 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.16□□□□□ -0.14
LITAFQ99732 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LITAFQ99732 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LITAFQ99732 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LITAFQ99732 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LITAFQ99732 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LITAFQ99732 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LITAFQ99732 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LITAFQ99732 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LITAFQ99732 AC120024.1-201ENST00000562672 995 ntBASIC14.16□□□□□ -0.14
LITAFQ99732 LSM7-203ENST00000585409 512 ntTSL 2 BASIC14.16□□□□□ -0.14
LITAFQ99732 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LITAFQ99732 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LITAFQ99732 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC14.16□□□□□ -0.14
LITAFQ99732 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LITAFQ99732 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC14.16□□□□□ -0.14
LITAFQ99732 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LITAFQ99732 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LITAFQ99732 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LITAFQ99732 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC14.15□□□□□ -0.14
LITAFQ99732 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms