Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.27■■□□□ 1
NDNQ99608 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NDNQ99608 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
NDNQ99608 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NDNQ99608 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NDNQ99608 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.27■■□□□ 1
NDNQ99608 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NDNQ99608 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
NDNQ99608 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NDNQ99608 AP004607.7-201ENST00000527152 1677 ntBASIC21.27■■□□□ 1
NDNQ99608 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NDNQ99608 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
NDNQ99608 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
NDNQ99608 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDNQ99608 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDNQ99608 Z98882.1-201ENST00000622160 2253 ntBASIC21.26■□□□□ 0.99
NDNQ99608 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.26■□□□□ 0.99
NDNQ99608 AC005229.4-201ENST00000610085 2198 ntBASIC21.26■□□□□ 0.99
NDNQ99608 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
NDNQ99608 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDNQ99608 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.26■□□□□ 0.99
NDNQ99608 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.26■□□□□ 0.99
NDNQ99608 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.26■□□□□ 0.99
NDNQ99608 AC233992.3-201ENST00000607491 485 ntBASIC21.26■□□□□ 0.99
NDNQ99608 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDNQ99608 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.26■□□□□ 0.99
NDNQ99608 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDNQ99608 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDNQ99608 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
NDNQ99608 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
NDNQ99608 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NDNQ99608 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NDNQ99608 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NDNQ99608 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.25■□□□□ 0.99
NDNQ99608 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.25■□□□□ 0.99
NDNQ99608 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.25■□□□□ 0.99
NDNQ99608 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
NDNQ99608 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
NDNQ99608 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.25■□□□□ 0.99
NDNQ99608 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NDNQ99608 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NDNQ99608 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NDNQ99608 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NDNQ99608 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
NDNQ99608 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NDNQ99608 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
NDNQ99608 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NDNQ99608 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
NDNQ99608 PBX2P1-201ENST00000493219 1291 ntBASIC21.24■□□□□ 0.99
NDNQ99608 AC126544.1-201ENST00000580842 1059 ntBASIC21.24■□□□□ 0.99
NDNQ99608 AC008764.7-201ENST00000593779 1081 ntBASIC21.24■□□□□ 0.99
NDNQ99608 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NDNQ99608 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NDNQ99608 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.24■□□□□ 0.99
NDNQ99608 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NDNQ99608 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NDNQ99608 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
NDNQ99608 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NDNQ99608 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NDNQ99608 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NDNQ99608 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
NDNQ99608 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.23■□□□□ 0.99
NDNQ99608 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.23■□□□□ 0.99
NDNQ99608 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NDNQ99608 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
NDNQ99608 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.23■□□□□ 0.99
NDNQ99608 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.23■□□□□ 0.99
NDNQ99608 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NDNQ99608 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NDNQ99608 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.23■□□□□ 0.99
NDNQ99608 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NDNQ99608 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.23■□□□□ 0.99
NDNQ99608 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NDNQ99608 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.23■□□□□ 0.99
NDNQ99608 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NDNQ99608 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
NDNQ99608 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
NDNQ99608 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NDNQ99608 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
NDNQ99608 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NDNQ99608 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.22■□□□□ 0.99
NDNQ99608 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NDNQ99608 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NDNQ99608 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NDNQ99608 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.22■□□□□ 0.99
NDNQ99608 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NDNQ99608 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NDNQ99608 AF106564.1-201ENST00000607058 2553 ntBASIC21.22■□□□□ 0.99
NDNQ99608 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NDNQ99608 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
NDNQ99608 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NDNQ99608 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NDNQ99608 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
NDNQ99608 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NDNQ99608 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.21■□□□□ 0.99
NDNQ99608 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NDNQ99608 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NDNQ99608 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.21■□□□□ 0.99
NDNQ99608 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.21■□□□□ 0.99
NDNQ99608 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms