Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NEK1Q96PY6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC25.21■■□□□ 1.63
NEK1Q96PY6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NEK1Q96PY6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC25.21■■□□□ 1.63
NEK1Q96PY6 AL358852.1-201ENST00000623174 1268 ntBASIC25.21■■□□□ 1.63
NEK1Q96PY6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
NEK1Q96PY6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NEK1Q96PY6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NEK1Q96PY6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
NEK1Q96PY6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
NEK1Q96PY6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
NEK1Q96PY6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
NEK1Q96PY6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
NEK1Q96PY6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
NEK1Q96PY6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC25.2■■□□□ 1.62
NEK1Q96PY6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC25.2■■□□□ 1.62
NEK1Q96PY6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC25.2■■□□□ 1.62
NEK1Q96PY6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
NEK1Q96PY6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC25.2■■□□□ 1.62
NEK1Q96PY6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
NEK1Q96PY6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NEK1Q96PY6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NEK1Q96PY6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
NEK1Q96PY6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NEK1Q96PY6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NEK1Q96PY6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
NEK1Q96PY6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NEK1Q96PY6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
NEK1Q96PY6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC25.19■■□□□ 1.62
NEK1Q96PY6 MIR6084-201ENST00000622012 110 ntBASIC25.19■■□□□ 1.62
NEK1Q96PY6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC25.19■■□□□ 1.62
NEK1Q96PY6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NEK1Q96PY6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
NEK1Q96PY6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
NEK1Q96PY6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
NEK1Q96PY6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC25.18■■□□□ 1.62
NEK1Q96PY6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
NEK1Q96PY6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
NEK1Q96PY6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
NEK1Q96PY6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
NEK1Q96PY6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
NEK1Q96PY6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
NEK1Q96PY6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC25.18■■□□□ 1.62
NEK1Q96PY6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC25.18■■□□□ 1.62
NEK1Q96PY6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC25.18■■□□□ 1.62
NEK1Q96PY6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC25.18■■□□□ 1.62
NEK1Q96PY6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
NEK1Q96PY6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC25.18■■□□□ 1.62
NEK1Q96PY6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC25.17■■□□□ 1.62
NEK1Q96PY6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
NEK1Q96PY6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC25.17■■□□□ 1.62
NEK1Q96PY6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
NEK1Q96PY6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
NEK1Q96PY6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
NEK1Q96PY6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
NEK1Q96PY6 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.17■■□□□ 1.62
NEK1Q96PY6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
NEK1Q96PY6 NT5C3AP1-201ENST00000394500 1012 ntBASIC25.17■■□□□ 1.62
NEK1Q96PY6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC25.17■■□□□ 1.62
NEK1Q96PY6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.17■■□□□ 1.62
NEK1Q96PY6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC25.17■■□□□ 1.62
NEK1Q96PY6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.17■■□□□ 1.62
NEK1Q96PY6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC25.17■■□□□ 1.62
NEK1Q96PY6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
NEK1Q96PY6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC25.17■■□□□ 1.62
NEK1Q96PY6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
NEK1Q96PY6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
NEK1Q96PY6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
NEK1Q96PY6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
NEK1Q96PY6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
NEK1Q96PY6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC25.16■■□□□ 1.62
NEK1Q96PY6 TPRG1LP1-201ENST00000598702 760 ntBASIC25.16■■□□□ 1.62
NEK1Q96PY6 AL137060.1-201ENST00000618151 2648 ntBASIC25.16■■□□□ 1.62
NEK1Q96PY6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
NEK1Q96PY6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
NEK1Q96PY6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
NEK1Q96PY6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
NEK1Q96PY6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.15■■□□□ 1.62
NEK1Q96PY6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.15■■□□□ 1.62
NEK1Q96PY6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC25.15■■□□□ 1.62
NEK1Q96PY6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
NEK1Q96PY6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
NEK1Q96PY6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
NEK1Q96PY6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NEK1Q96PY6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC25.14■■□□□ 1.62
NEK1Q96PY6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
NEK1Q96PY6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
NEK1Q96PY6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
NEK1Q96PY6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
NEK1Q96PY6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
NEK1Q96PY6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.61
NEK1Q96PY6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
NEK1Q96PY6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
NEK1Q96PY6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
NEK1Q96PY6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC25.14■■□□□ 1.61
NEK1Q96PY6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
NEK1Q96PY6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
NEK1Q96PY6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
NEK1Q96PY6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
NEK1Q96PY6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms