Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
C9orf72Q96LT7 EDA-201ENST00000338901 1233 ntBASIC21.84■■□□□ 1.09
C9orf72Q96LT7 AC099791.2-201ENST00000605725 427 ntBASIC21.84■■□□□ 1.09
C9orf72Q96LT7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
C9orf72Q96LT7 AC133637.1-201ENST00000624115 1537 ntBASIC21.84■■□□□ 1.09
C9orf72Q96LT7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
C9orf72Q96LT7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
C9orf72Q96LT7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.83■■□□□ 1.09
C9orf72Q96LT7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.83■■□□□ 1.09
C9orf72Q96LT7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
C9orf72Q96LT7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
C9orf72Q96LT7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.83■■□□□ 1.09
C9orf72Q96LT7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
C9orf72Q96LT7 AC006455.2-201ENST00000429931 906 ntBASIC21.83■■□□□ 1.09
C9orf72Q96LT7 SUDS3P1-201ENST00000505831 966 ntBASIC21.83■■□□□ 1.09
C9orf72Q96LT7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.83■■□□□ 1.09
C9orf72Q96LT7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.83■■□□□ 1.09
C9orf72Q96LT7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.83■■□□□ 1.09
C9orf72Q96LT7 AL355001.2-201ENST00000620617 1191 ntBASIC21.83■■□□□ 1.09
C9orf72Q96LT7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.83■■□□□ 1.09
C9orf72Q96LT7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
C9orf72Q96LT7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
C9orf72Q96LT7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.83■■□□□ 1.08
C9orf72Q96LT7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
C9orf72Q96LT7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
C9orf72Q96LT7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
C9orf72Q96LT7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
C9orf72Q96LT7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
C9orf72Q96LT7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.82■■□□□ 1.08
C9orf72Q96LT7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.82■■□□□ 1.08
C9orf72Q96LT7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
C9orf72Q96LT7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
C9orf72Q96LT7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
C9orf72Q96LT7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
C9orf72Q96LT7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.82■■□□□ 1.08
C9orf72Q96LT7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
C9orf72Q96LT7 OR7E47P-201ENST00000546390 1422 ntBASIC21.81■■□□□ 1.08
C9orf72Q96LT7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
C9orf72Q96LT7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
C9orf72Q96LT7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.81■■□□□ 1.08
C9orf72Q96LT7 pRNA.6-201ENST00000610482 90 ntBASIC21.81■■□□□ 1.08
C9orf72Q96LT7 pRNA.5-201ENST00000612139 90 ntBASIC21.81■■□□□ 1.08
C9orf72Q96LT7 pRNA.11-201ENST00000618423 90 ntBASIC21.81■■□□□ 1.08
C9orf72Q96LT7 pRNA.13-201ENST00000619112 90 ntBASIC21.81■■□□□ 1.08
C9orf72Q96LT7 AC241377.3-202ENST00000626088 1088 ntBASIC21.81■■□□□ 1.08
C9orf72Q96LT7 AC241585.3-202ENST00000628937 1088 ntBASIC21.81■■□□□ 1.08
C9orf72Q96LT7 AC245100.8-202ENST00000629247 1058 ntBASIC21.81■■□□□ 1.08
C9orf72Q96LT7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
C9orf72Q96LT7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
C9orf72Q96LT7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.81■■□□□ 1.08
C9orf72Q96LT7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
C9orf72Q96LT7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
C9orf72Q96LT7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.81■■□□□ 1.08
C9orf72Q96LT7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
C9orf72Q96LT7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
C9orf72Q96LT7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
C9orf72Q96LT7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
C9orf72Q96LT7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.8■■□□□ 1.08
C9orf72Q96LT7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C9orf72Q96LT7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
C9orf72Q96LT7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C9orf72Q96LT7 SERBP1P1-201ENST00000396021 1160 ntBASIC21.8■■□□□ 1.08
C9orf72Q96LT7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
C9orf72Q96LT7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
C9orf72Q96LT7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
C9orf72Q96LT7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.8■■□□□ 1.08
C9orf72Q96LT7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
C9orf72Q96LT7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
C9orf72Q96LT7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
C9orf72Q96LT7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C9orf72Q96LT7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C9orf72Q96LT7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.8■■□□□ 1.08
C9orf72Q96LT7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
C9orf72Q96LT7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
C9orf72Q96LT7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
C9orf72Q96LT7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
C9orf72Q96LT7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
C9orf72Q96LT7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
C9orf72Q96LT7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.79■■□□□ 1.08
C9orf72Q96LT7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
C9orf72Q96LT7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
C9orf72Q96LT7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
C9orf72Q96LT7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
C9orf72Q96LT7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
C9orf72Q96LT7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.78■■□□□ 1.08
C9orf72Q96LT7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.78■■□□□ 1.08
C9orf72Q96LT7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
C9orf72Q96LT7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.78■■□□□ 1.08
C9orf72Q96LT7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
C9orf72Q96LT7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
C9orf72Q96LT7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
C9orf72Q96LT7 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.78■■□□□ 1.08
C9orf72Q96LT7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.78■■□□□ 1.08
C9orf72Q96LT7 AC104564.3-201ENST00000582367 638 ntBASIC21.78■■□□□ 1.08
C9orf72Q96LT7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
C9orf72Q96LT7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.78■■□□□ 1.08
C9orf72Q96LT7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
C9orf72Q96LT7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.78■■□□□ 1.08
C9orf72Q96LT7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.78■■□□□ 1.08
C9orf72Q96LT7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms