Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SPG11Q96JI7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPG11Q96JI7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
SPG11Q96JI7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SPG11Q96JI7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.14■□□□□ 0.5
SPG11Q96JI7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SPG11Q96JI7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SPG11Q96JI7 MIR718-201ENST00000390190 70 ntBASIC18.14■□□□□ 0.5
SPG11Q96JI7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.14■□□□□ 0.5
SPG11Q96JI7 AC069236.1-201ENST00000604339 616 ntBASIC18.14■□□□□ 0.5
SPG11Q96JI7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
SPG11Q96JI7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
SPG11Q96JI7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPG11Q96JI7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPG11Q96JI7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.14■□□□□ 0.49
SPG11Q96JI7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SPG11Q96JI7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.14■□□□□ 0.49
SPG11Q96JI7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.14■□□□□ 0.49
SPG11Q96JI7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.14■□□□□ 0.49
SPG11Q96JI7 AC010331.1-201ENST00000611423 582 ntBASIC18.14■□□□□ 0.49
SPG11Q96JI7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPG11Q96JI7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SPG11Q96JI7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPG11Q96JI7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SPG11Q96JI7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPG11Q96JI7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.13■□□□□ 0.49
SPG11Q96JI7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.13■□□□□ 0.49
SPG11Q96JI7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.13■□□□□ 0.49
SPG11Q96JI7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.13■□□□□ 0.49
SPG11Q96JI7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.13■□□□□ 0.49
SPG11Q96JI7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
SPG11Q96JI7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPG11Q96JI7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPG11Q96JI7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPG11Q96JI7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPG11Q96JI7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SPG11Q96JI7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPG11Q96JI7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPG11Q96JI7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPG11Q96JI7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.13■□□□□ 0.49
SPG11Q96JI7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.13■□□□□ 0.49
SPG11Q96JI7 EEF1DP3-203ENST00000566025 782 ntBASIC18.13■□□□□ 0.49
SPG11Q96JI7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.13■□□□□ 0.49
SPG11Q96JI7 MIR4497-201ENST00000583208 89 ntBASIC18.13■□□□□ 0.49
SPG11Q96JI7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPG11Q96JI7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPG11Q96JI7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPG11Q96JI7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPG11Q96JI7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.13■□□□□ 0.49
SPG11Q96JI7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.13■□□□□ 0.49
SPG11Q96JI7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.12■□□□□ 0.49
SPG11Q96JI7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPG11Q96JI7 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.12■□□□□ 0.49
SPG11Q96JI7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SPG11Q96JI7 UBE2SP1-201ENST00000450587 669 ntBASIC18.12■□□□□ 0.49
SPG11Q96JI7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.12■□□□□ 0.49
SPG11Q96JI7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SPG11Q96JI7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.12■□□□□ 0.49
SPG11Q96JI7 AP004607.7-201ENST00000527152 1677 ntBASIC18.12■□□□□ 0.49
SPG11Q96JI7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPG11Q96JI7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SPG11Q96JI7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SPG11Q96JI7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SPG11Q96JI7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.12■□□□□ 0.49
SPG11Q96JI7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SPG11Q96JI7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.12■□□□□ 0.49
SPG11Q96JI7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SPG11Q96JI7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SPG11Q96JI7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPG11Q96JI7 AC142381.3-201ENST00000568208 1670 ntBASIC18.11■□□□□ 0.49
SPG11Q96JI7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPG11Q96JI7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPG11Q96JI7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SPG11Q96JI7 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.11■□□□□ 0.49
SPG11Q96JI7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.11■□□□□ 0.49
SPG11Q96JI7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.11■□□□□ 0.49
SPG11Q96JI7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.11■□□□□ 0.49
SPG11Q96JI7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPG11Q96JI7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SPG11Q96JI7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPG11Q96JI7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPG11Q96JI7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPG11Q96JI7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPG11Q96JI7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SPG11Q96JI7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.11■□□□□ 0.49
SPG11Q96JI7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPG11Q96JI7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SPG11Q96JI7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SPG11Q96JI7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.1■□□□□ 0.49
SPG11Q96JI7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.1■□□□□ 0.49
SPG11Q96JI7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.1■□□□□ 0.49
SPG11Q96JI7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.1■□□□□ 0.49
SPG11Q96JI7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPG11Q96JI7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPG11Q96JI7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SPG11Q96JI7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPG11Q96JI7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPG11Q96JI7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPG11Q96JI7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SPG11Q96JI7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms