Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PDLIM5Q96HC4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.93
PDLIM5Q96HC4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
PDLIM5Q96HC4 FEM1AP4-201ENST00000443167 1987 ntBASIC20.83■□□□□ 0.93
PDLIM5Q96HC4 AL137060.1-201ENST00000618151 2648 ntBASIC20.83■□□□□ 0.93
PDLIM5Q96HC4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDLIM5Q96HC4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PDLIM5Q96HC4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.83■□□□□ 0.92
PDLIM5Q96HC4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
PDLIM5Q96HC4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PDLIM5Q96HC4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PDLIM5Q96HC4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDLIM5Q96HC4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.83■□□□□ 0.92
PDLIM5Q96HC4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDLIM5Q96HC4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM5Q96HC4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM5Q96HC4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.82■□□□□ 0.92
PDLIM5Q96HC4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.82■□□□□ 0.92
PDLIM5Q96HC4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM5Q96HC4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PDLIM5Q96HC4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PDLIM5Q96HC4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM5Q96HC4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.82■□□□□ 0.92
PDLIM5Q96HC4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM5Q96HC4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.82■□□□□ 0.92
PDLIM5Q96HC4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.82■□□□□ 0.92
PDLIM5Q96HC4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PDLIM5Q96HC4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM5Q96HC4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PDLIM5Q96HC4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM5Q96HC4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PDLIM5Q96HC4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.82■□□□□ 0.92
PDLIM5Q96HC4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM5Q96HC4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM5Q96HC4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM5Q96HC4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 AL024507.2-201ENST00000606070 2574 ntBASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM5Q96HC4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDLIM5Q96HC4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDLIM5Q96HC4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDLIM5Q96HC4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.8■□□□□ 0.92
PDLIM5Q96HC4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.8■□□□□ 0.92
PDLIM5Q96HC4 AC142381.2-201ENST00000566120 298 ntBASIC20.8■□□□□ 0.92
PDLIM5Q96HC4 AC005837.3-201ENST00000612163 286 ntBASIC20.8■□□□□ 0.92
PDLIM5Q96HC4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDLIM5Q96HC4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PDLIM5Q96HC4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.8■□□□□ 0.92
PDLIM5Q96HC4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDLIM5Q96HC4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDLIM5Q96HC4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.8■□□□□ 0.92
PDLIM5Q96HC4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.79■□□□□ 0.92
PDLIM5Q96HC4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.79■□□□□ 0.92
PDLIM5Q96HC4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.79■□□□□ 0.92
PDLIM5Q96HC4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDLIM5Q96HC4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDLIM5Q96HC4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDLIM5Q96HC4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.79■□□□□ 0.92
PDLIM5Q96HC4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.79■□□□□ 0.92
PDLIM5Q96HC4 AL354811.1-201ENST00000610286 706 ntBASIC20.79■□□□□ 0.92
PDLIM5Q96HC4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDLIM5Q96HC4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDLIM5Q96HC4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDLIM5Q96HC4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PDLIM5Q96HC4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDLIM5Q96HC4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PDLIM5Q96HC4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDLIM5Q96HC4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDLIM5Q96HC4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDLIM5Q96HC4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.78■□□□□ 0.92
PDLIM5Q96HC4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.78■□□□□ 0.92
PDLIM5Q96HC4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PDLIM5Q96HC4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.78■□□□□ 0.92
PDLIM5Q96HC4 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.78■□□□□ 0.92
PDLIM5Q96HC4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.78■□□□□ 0.92
PDLIM5Q96HC4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.78■□□□□ 0.92
PDLIM5Q96HC4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms