Protein–RNA interactions for Protein: Q96H20

SNF8, Vacuolar-sorting protein SNF8, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8Q96H20 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SNF8Q96H20 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNF8Q96H20 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNF8Q96H20 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
SNF8Q96H20 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
SNF8Q96H20 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.85■■□□□ 1.09
SNF8Q96H20 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNF8Q96H20 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNF8Q96H20 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
SNF8Q96H20 AL049796.1-201ENST00000565336 1766 ntBASIC21.84■■□□□ 1.09
SNF8Q96H20 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SNF8Q96H20 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNF8Q96H20 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNF8Q96H20 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNF8Q96H20 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNF8Q96H20 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNF8Q96H20 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
SNF8Q96H20 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.84■■□□□ 1.09
SNF8Q96H20 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.84■■□□□ 1.09
SNF8Q96H20 AL356740.2-201ENST00000601559 647 ntBASIC21.84■■□□□ 1.09
SNF8Q96H20 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.84■■□□□ 1.09
SNF8Q96H20 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNF8Q96H20 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.84■■□□□ 1.09
SNF8Q96H20 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
SNF8Q96H20 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SNF8Q96H20 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.83■■□□□ 1.09
SNF8Q96H20 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SNF8Q96H20 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SNF8Q96H20 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.83■■□□□ 1.09
SNF8Q96H20 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SNF8Q96H20 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SNF8Q96H20 AC010525.1-201ENST00000585559 441 ntBASIC21.83■■□□□ 1.09
SNF8Q96H20 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.83■■□□□ 1.08
SNF8Q96H20 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SNF8Q96H20 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SNF8Q96H20 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNF8Q96H20 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNF8Q96H20 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SNF8Q96H20 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
SNF8Q96H20 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.82■■□□□ 1.08
SNF8Q96H20 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNF8Q96H20 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNF8Q96H20 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNF8Q96H20 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNF8Q96H20 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNF8Q96H20 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNF8Q96H20 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNF8Q96H20 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.82■■□□□ 1.08
SNF8Q96H20 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.82■■□□□ 1.08
SNF8Q96H20 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNF8Q96H20 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNF8Q96H20 AC003102.1-202ENST00000563394 1796 ntBASIC21.82■■□□□ 1.08
SNF8Q96H20 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SNF8Q96H20 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNF8Q96H20 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SNF8Q96H20 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.81■■□□□ 1.08
SNF8Q96H20 AC092171.4-201ENST00000609130 632 ntBASIC21.81■■□□□ 1.08
SNF8Q96H20 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNF8Q96H20 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNF8Q96H20 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNF8Q96H20 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNF8Q96H20 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.8■■□□□ 1.08
SNF8Q96H20 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNF8Q96H20 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
SNF8Q96H20 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNF8Q96H20 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.8■■□□□ 1.08
SNF8Q96H20 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.8■■□□□ 1.08
SNF8Q96H20 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.8■■□□□ 1.08
SNF8Q96H20 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNF8Q96H20 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.8■■□□□ 1.08
SNF8Q96H20 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.8■■□□□ 1.08
SNF8Q96H20 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNF8Q96H20 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNF8Q96H20 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SNF8Q96H20 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNF8Q96H20 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
SNF8Q96H20 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.8■■□□□ 1.08
SNF8Q96H20 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SNF8Q96H20 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNF8Q96H20 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.8■■□□□ 1.08
SNF8Q96H20 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.8■■□□□ 1.08
SNF8Q96H20 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.8■■□□□ 1.08
SNF8Q96H20 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNF8Q96H20 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SNF8Q96H20 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNF8Q96H20 AP004607.7-201ENST00000527152 1677 ntBASIC21.79■■□□□ 1.08
SNF8Q96H20 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.79■■□□□ 1.08
SNF8Q96H20 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SNF8Q96H20 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SNF8Q96H20 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.79■■□□□ 1.08
SNF8Q96H20 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.79■■□□□ 1.08
SNF8Q96H20 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
SNF8Q96H20 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.79■■□□□ 1.08
SNF8Q96H20 SRD5A1P1-201ENST00000442297 786 ntBASIC21.79■■□□□ 1.08
SNF8Q96H20 MIR3621-201ENST00000580529 85 ntBASIC21.79■■□□□ 1.08
SNF8Q96H20 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.79■■□□□ 1.08
SNF8Q96H20 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNF8Q96H20 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNF8Q96H20 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.79■■□□□ 1.08
SNF8Q96H20 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms