Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TIMD4Q96H15 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TIMD4Q96H15 AC127496.7-201ENST00000625110 1798 ntBASIC17.86■□□□□ 0.45
TIMD4Q96H15 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TIMD4Q96H15 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIMD4Q96H15 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIMD4Q96H15 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIMD4Q96H15 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIMD4Q96H15 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.85■□□□□ 0.45
TIMD4Q96H15 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TIMD4Q96H15 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.85■□□□□ 0.45
TIMD4Q96H15 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.85■□□□□ 0.45
TIMD4Q96H15 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.85■□□□□ 0.45
TIMD4Q96H15 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TIMD4Q96H15 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.85■□□□□ 0.45
TIMD4Q96H15 AC138907.5-202ENST00000569484 235 ntBASIC17.85■□□□□ 0.45
TIMD4Q96H15 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TIMD4Q96H15 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.85■□□□□ 0.45
TIMD4Q96H15 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.85■□□□□ 0.45
TIMD4Q96H15 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TIMD4Q96H15 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.84■□□□□ 0.45
TIMD4Q96H15 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TIMD4Q96H15 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TIMD4Q96H15 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TIMD4Q96H15 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TIMD4Q96H15 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.84■□□□□ 0.45
TIMD4Q96H15 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.84■□□□□ 0.45
TIMD4Q96H15 AC120498.10-201ENST00000621827 505 ntBASIC17.84■□□□□ 0.45
TIMD4Q96H15 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.84■□□□□ 0.45
TIMD4Q96H15 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TIMD4Q96H15 C1orf229-201ENST00000623686 2258 ntBASIC17.84■□□□□ 0.45
TIMD4Q96H15 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
TIMD4Q96H15 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.84■□□□□ 0.45
TIMD4Q96H15 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.84■□□□□ 0.45
TIMD4Q96H15 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.84■□□□□ 0.45
TIMD4Q96H15 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
TIMD4Q96H15 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.83■□□□□ 0.45
TIMD4Q96H15 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.83■□□□□ 0.45
TIMD4Q96H15 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TIMD4Q96H15 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TIMD4Q96H15 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TIMD4Q96H15 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TIMD4Q96H15 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TIMD4Q96H15 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.83■□□□□ 0.44
TIMD4Q96H15 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.83■□□□□ 0.44
TIMD4Q96H15 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TIMD4Q96H15 AC010141.2-201ENST00000452426 721 ntBASIC17.83■□□□□ 0.44
TIMD4Q96H15 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.83■□□□□ 0.44
TIMD4Q96H15 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.83■□□□□ 0.44
TIMD4Q96H15 KRT18P20-201ENST00000548986 1279 ntBASIC17.83■□□□□ 0.44
TIMD4Q96H15 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.83■□□□□ 0.44
TIMD4Q96H15 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TIMD4Q96H15 AC053503.5-201ENST00000601508 636 ntBASIC17.83■□□□□ 0.44
TIMD4Q96H15 AC011767.1-201ENST00000617410 1153 ntBASIC17.83■□□□□ 0.44
TIMD4Q96H15 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TIMD4Q96H15 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.83■□□□□ 0.44
TIMD4Q96H15 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TIMD4Q96H15 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.82■□□□□ 0.44
TIMD4Q96H15 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMD4Q96H15 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TIMD4Q96H15 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMD4Q96H15 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TIMD4Q96H15 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TIMD4Q96H15 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMD4Q96H15 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TIMD4Q96H15 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMD4Q96H15 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMD4Q96H15 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.82■□□□□ 0.44
TIMD4Q96H15 AC092053.2-201ENST00000640557 1818 ntBASIC17.82■□□□□ 0.44
TIMD4Q96H15 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMD4Q96H15 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.82■□□□□ 0.44
TIMD4Q96H15 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TIMD4Q96H15 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.82■□□□□ 0.44
TIMD4Q96H15 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.82■□□□□ 0.44
TIMD4Q96H15 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.82■□□□□ 0.44
TIMD4Q96H15 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.82■□□□□ 0.44
TIMD4Q96H15 AC008175.2-201ENST00000612840 297 ntBASIC17.82■□□□□ 0.44
TIMD4Q96H15 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMD4Q96H15 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.82■□□□□ 0.44
TIMD4Q96H15 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TIMD4Q96H15 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TIMD4Q96H15 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TIMD4Q96H15 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMD4Q96H15 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.81■□□□□ 0.44
TIMD4Q96H15 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
TIMD4Q96H15 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.81■□□□□ 0.44
TIMD4Q96H15 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMD4Q96H15 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TIMD4Q96H15 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMD4Q96H15 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMD4Q96H15 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMD4Q96H15 EEF1DP3-203ENST00000566025 782 ntBASIC17.81■□□□□ 0.44
TIMD4Q96H15 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMD4Q96H15 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TIMD4Q96H15 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMD4Q96H15 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TIMD4Q96H15 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TIMD4Q96H15 AIRN-201ENST00000601203 4374 ntBASIC17.8■□□□□ 0.44
TIMD4Q96H15 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TIMD4Q96H15 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms