Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CPNE2Q96FN4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CPNE2Q96FN4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE2Q96FN4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CPNE2Q96FN4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.39■□□□□ 0.53
CPNE2Q96FN4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE2Q96FN4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE2Q96FN4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE2Q96FN4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.39■□□□□ 0.53
CPNE2Q96FN4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE2Q96FN4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE2Q96FN4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CPNE2Q96FN4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE2Q96FN4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CPNE2Q96FN4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE2Q96FN4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE2Q96FN4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.38■□□□□ 0.53
CPNE2Q96FN4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CPNE2Q96FN4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE2Q96FN4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE2Q96FN4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE2Q96FN4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE2Q96FN4 OXCT2P1-201ENST00000447263 1535 ntBASIC18.38■□□□□ 0.53
CPNE2Q96FN4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.38■□□□□ 0.53
CPNE2Q96FN4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE2Q96FN4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CPNE2Q96FN4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CPNE2Q96FN4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.37■□□□□ 0.53
CPNE2Q96FN4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE2Q96FN4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE2Q96FN4 Z98882.1-201ENST00000622160 2253 ntBASIC18.37■□□□□ 0.53
CPNE2Q96FN4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.37■□□□□ 0.53
CPNE2Q96FN4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CPNE2Q96FN4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE2Q96FN4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE2Q96FN4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CPNE2Q96FN4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE2Q96FN4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE2Q96FN4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE2Q96FN4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE2Q96FN4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE2Q96FN4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CPNE2Q96FN4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.37■□□□□ 0.53
CPNE2Q96FN4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CPNE2Q96FN4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE2Q96FN4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE2Q96FN4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CPNE2Q96FN4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE2Q96FN4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CPNE2Q96FN4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CPNE2Q96FN4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CPNE2Q96FN4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.36■□□□□ 0.53
CPNE2Q96FN4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.36■□□□□ 0.53
CPNE2Q96FN4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE2Q96FN4 SYT6-210ENST00000641643 1587 ntBASIC18.36■□□□□ 0.53
CPNE2Q96FN4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE2Q96FN4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE2Q96FN4 AC073130.3-201ENST00000624389 2278 ntBASIC18.35■□□□□ 0.53
CPNE2Q96FN4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE2Q96FN4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
CPNE2Q96FN4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.35■□□□□ 0.53
CPNE2Q96FN4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE2Q96FN4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.35■□□□□ 0.53
CPNE2Q96FN4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE2Q96FN4 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.35■□□□□ 0.53
CPNE2Q96FN4 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.35■□□□□ 0.53
CPNE2Q96FN4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE2Q96FN4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CPNE2Q96FN4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE2Q96FN4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.35■□□□□ 0.53
CPNE2Q96FN4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE2Q96FN4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
CPNE2Q96FN4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.35■□□□□ 0.53
CPNE2Q96FN4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CPNE2Q96FN4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CPNE2Q96FN4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
CPNE2Q96FN4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE2Q96FN4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE2Q96FN4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.34■□□□□ 0.53
CPNE2Q96FN4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
CPNE2Q96FN4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.34■□□□□ 0.53
CPNE2Q96FN4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE2Q96FN4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE2Q96FN4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE2Q96FN4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE2Q96FN4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE2Q96FN4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE2Q96FN4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE2Q96FN4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE2Q96FN4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE2Q96FN4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.34■□□□□ 0.53
CPNE2Q96FN4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.34■□□□□ 0.53
CPNE2Q96FN4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE2Q96FN4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CPNE2Q96FN4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE2Q96FN4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CPNE2Q96FN4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE2Q96FN4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.34■□□□□ 0.53
CPNE2Q96FN4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.34■□□□□ 0.53
CPNE2Q96FN4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms