Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXRED1Q96CU9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.43■□□□□ 0.54
FOXRED1Q96CU9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
FOXRED1Q96CU9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.43■□□□□ 0.54
FOXRED1Q96CU9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXRED1Q96CU9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXRED1Q96CU9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXRED1Q96CU9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.43■□□□□ 0.54
FOXRED1Q96CU9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
FOXRED1Q96CU9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 AC008406.3-201ENST00000620001 1374 ntBASIC18.42■□□□□ 0.54
FOXRED1Q96CU9 AC026471.6-201ENST00000622954 1905 ntBASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 AL034346.1-201ENST00000568244 1277 ntBASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 pRNA.6-201ENST00000610482 90 ntBASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 pRNA.5-201ENST00000612139 90 ntBASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 pRNA.11-201ENST00000618423 90 ntBASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 pRNA.13-201ENST00000619112 90 ntBASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 LINC01521-201ENST00000504184 1943 ntBASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXRED1Q96CU9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXRED1Q96CU9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXRED1Q96CU9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
FOXRED1Q96CU9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXRED1Q96CU9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXRED1Q96CU9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXRED1Q96CU9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXRED1Q96CU9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXRED1Q96CU9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.4■□□□□ 0.54
FOXRED1Q96CU9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXRED1Q96CU9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXRED1Q96CU9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.4■□□□□ 0.54
FOXRED1Q96CU9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
FOXRED1Q96CU9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXRED1Q96CU9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
FOXRED1Q96CU9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
FOXRED1Q96CU9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXRED1Q96CU9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXRED1Q96CU9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXRED1Q96CU9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
FOXRED1Q96CU9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXRED1Q96CU9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.39■□□□□ 0.53
FOXRED1Q96CU9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXRED1Q96CU9 AC131281.2-201ENST00000520478 145 ntBASIC18.39■□□□□ 0.53
FOXRED1Q96CU9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.39■□□□□ 0.53
FOXRED1Q96CU9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXRED1Q96CU9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
FOXRED1Q96CU9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.38■□□□□ 0.53
FOXRED1Q96CU9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXRED1Q96CU9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
FOXRED1Q96CU9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXRED1Q96CU9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXRED1Q96CU9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXRED1Q96CU9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXRED1Q96CU9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXRED1Q96CU9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXRED1Q96CU9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXRED1Q96CU9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXRED1Q96CU9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXRED1Q96CU9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXRED1Q96CU9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXRED1Q96CU9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms