Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SYT6-210ENST00000641643 1587 ntBASIC17.85■□□□□ 0.45
RTN4IP1Q8WWV3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RTN4IP1Q8WWV3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4IP1Q8WWV3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4IP1Q8WWV3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4IP1Q8WWV3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4IP1Q8WWV3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4IP1Q8WWV3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4IP1Q8WWV3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
RTN4IP1Q8WWV3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RTN4IP1Q8WWV3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.84■□□□□ 0.45
RTN4IP1Q8WWV3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4IP1Q8WWV3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4IP1Q8WWV3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.84■□□□□ 0.45
RTN4IP1Q8WWV3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RTN4IP1Q8WWV3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RTN4IP1Q8WWV3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4IP1Q8WWV3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.84■□□□□ 0.45
RTN4IP1Q8WWV3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.83■□□□□ 0.45
RTN4IP1Q8WWV3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTN4IP1Q8WWV3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RTN4IP1Q8WWV3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
RTN4IP1Q8WWV3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
RTN4IP1Q8WWV3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
RTN4IP1Q8WWV3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.83■□□□□ 0.45
RTN4IP1Q8WWV3 AC008406.3-201ENST00000620001 1374 ntBASIC17.83■□□□□ 0.45
RTN4IP1Q8WWV3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTN4IP1Q8WWV3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.83■□□□□ 0.44
RTN4IP1Q8WWV3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTN4IP1Q8WWV3 AL138724.1-201ENST00000606771 1088 ntBASIC17.83■□□□□ 0.44
RTN4IP1Q8WWV3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTN4IP1Q8WWV3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
RTN4IP1Q8WWV3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTN4IP1Q8WWV3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTN4IP1Q8WWV3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTN4IP1Q8WWV3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTN4IP1Q8WWV3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
RTN4IP1Q8WWV3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTN4IP1Q8WWV3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTN4IP1Q8WWV3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 SERBP1P1-201ENST00000396021 1160 ntBASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4IP1Q8WWV3 AL157384.1-201ENST00000445995 2473 ntBASIC17.81■□□□□ 0.44
RTN4IP1Q8WWV3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.81■□□□□ 0.44
RTN4IP1Q8WWV3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4IP1Q8WWV3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4IP1Q8WWV3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
RTN4IP1Q8WWV3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4IP1Q8WWV3 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.81■□□□□ 0.44
RTN4IP1Q8WWV3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.81■□□□□ 0.44
RTN4IP1Q8WWV3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4IP1Q8WWV3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4IP1Q8WWV3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.81■□□□□ 0.44
RTN4IP1Q8WWV3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTN4IP1Q8WWV3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN4IP1Q8WWV3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RTN4IP1Q8WWV3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RTN4IP1Q8WWV3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN4IP1Q8WWV3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.8■□□□□ 0.44
RTN4IP1Q8WWV3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.8■□□□□ 0.44
RTN4IP1Q8WWV3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
RTN4IP1Q8WWV3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN4IP1Q8WWV3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.8■□□□□ 0.44
RTN4IP1Q8WWV3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN4IP1Q8WWV3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.8■□□□□ 0.44
RTN4IP1Q8WWV3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTN4IP1Q8WWV3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN4IP1Q8WWV3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RTN4IP1Q8WWV3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.79■□□□□ 0.44
RTN4IP1Q8WWV3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4IP1Q8WWV3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.79■□□□□ 0.44
RTN4IP1Q8WWV3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4IP1Q8WWV3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4IP1Q8WWV3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4IP1Q8WWV3 LINC01521-201ENST00000504184 1943 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms