Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 EDA-201ENST00000338901 1233 ntBASIC22.1■■□□□ 1.13
CCHCR1Q8TD31 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.1■■□□□ 1.13
CCHCR1Q8TD31 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CCHCR1Q8TD31 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.1■■□□□ 1.13
CCHCR1Q8TD31 AC087239.1-201ENST00000622671 572 ntBASIC22.1■■□□□ 1.13
CCHCR1Q8TD31 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22.1■■□□□ 1.13
CCHCR1Q8TD31 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
CCHCR1Q8TD31 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
CCHCR1Q8TD31 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CCHCR1Q8TD31 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
CCHCR1Q8TD31 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCHCR1Q8TD31 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCHCR1Q8TD31 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
CCHCR1Q8TD31 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCHCR1Q8TD31 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCHCR1Q8TD31 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.09■■□□□ 1.13
CCHCR1Q8TD31 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CCHCR1Q8TD31 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.09■■□□□ 1.13
CCHCR1Q8TD31 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.09■■□□□ 1.13
CCHCR1Q8TD31 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.09■■□□□ 1.13
CCHCR1Q8TD31 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCHCR1Q8TD31 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
CCHCR1Q8TD31 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCHCR1Q8TD31 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCHCR1Q8TD31 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCHCR1Q8TD31 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
CCHCR1Q8TD31 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCHCR1Q8TD31 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCHCR1Q8TD31 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCHCR1Q8TD31 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
CCHCR1Q8TD31 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCHCR1Q8TD31 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.08■■□□□ 1.13
CCHCR1Q8TD31 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCHCR1Q8TD31 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CCHCR1Q8TD31 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.08■■□□□ 1.13
CCHCR1Q8TD31 AL355001.2-201ENST00000620617 1191 ntBASIC22.08■■□□□ 1.13
CCHCR1Q8TD31 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCHCR1Q8TD31 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCHCR1Q8TD31 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CCHCR1Q8TD31 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
CCHCR1Q8TD31 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.08■■□□□ 1.12
CCHCR1Q8TD31 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CCHCR1Q8TD31 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCHCR1Q8TD31 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CCHCR1Q8TD31 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
CCHCR1Q8TD31 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.07■■□□□ 1.12
CCHCR1Q8TD31 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.07■■□□□ 1.12
CCHCR1Q8TD31 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCHCR1Q8TD31 FEM1AP4-201ENST00000443167 1987 ntBASIC22.07■■□□□ 1.12
CCHCR1Q8TD31 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCHCR1Q8TD31 OR2I1P-207ENST00000453522 948 ntBASIC22.07■■□□□ 1.12
CCHCR1Q8TD31 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.07■■□□□ 1.12
CCHCR1Q8TD31 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.07■■□□□ 1.12
CCHCR1Q8TD31 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.07■■□□□ 1.12
CCHCR1Q8TD31 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.07■■□□□ 1.12
CCHCR1Q8TD31 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCHCR1Q8TD31 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCHCR1Q8TD31 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCHCR1Q8TD31 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CCHCR1Q8TD31 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
CCHCR1Q8TD31 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CCHCR1Q8TD31 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CCHCR1Q8TD31 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.06■■□□□ 1.12
CCHCR1Q8TD31 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CCHCR1Q8TD31 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.06■■□□□ 1.12
CCHCR1Q8TD31 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCHCR1Q8TD31 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CCHCR1Q8TD31 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCHCR1Q8TD31 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCHCR1Q8TD31 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CCHCR1Q8TD31 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCHCR1Q8TD31 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CCHCR1Q8TD31 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.05■■□□□ 1.12
CCHCR1Q8TD31 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCHCR1Q8TD31 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCHCR1Q8TD31 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CCHCR1Q8TD31 MIR638-201ENST00000385237 100 ntBASIC22.05■■□□□ 1.12
CCHCR1Q8TD31 BX842568.3-201ENST00000418104 571 ntBASIC22.05■■□□□ 1.12
CCHCR1Q8TD31 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CCHCR1Q8TD31 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.05■■□□□ 1.12
CCHCR1Q8TD31 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CCHCR1Q8TD31 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCHCR1Q8TD31 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCHCR1Q8TD31 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
CCHCR1Q8TD31 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCHCR1Q8TD31 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCHCR1Q8TD31 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.04■■□□□ 1.12
CCHCR1Q8TD31 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCHCR1Q8TD31 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCHCR1Q8TD31 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCHCR1Q8TD31 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCHCR1Q8TD31 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CCHCR1Q8TD31 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CCHCR1Q8TD31 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.04■■□□□ 1.12
CCHCR1Q8TD31 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.04■■□□□ 1.12
CCHCR1Q8TD31 AC005837.3-201ENST00000612163 286 ntBASIC22.04■■□□□ 1.12
CCHCR1Q8TD31 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCHCR1Q8TD31 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCHCR1Q8TD31 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCHCR1Q8TD31 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms