Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.13■□□□□ 0.97
RAB3IL1Q8TBN0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAB3IL1Q8TBN0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB3IL1Q8TBN0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB3IL1Q8TBN0 AL121603.2-201ENST00000557373 2117 ntBASIC21.13■□□□□ 0.97
RAB3IL1Q8TBN0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB3IL1Q8TBN0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RAB3IL1Q8TBN0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB3IL1Q8TBN0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB3IL1Q8TBN0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.12■□□□□ 0.97
RAB3IL1Q8TBN0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.12■□□□□ 0.97
RAB3IL1Q8TBN0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB3IL1Q8TBN0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAB3IL1Q8TBN0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB3IL1Q8TBN0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.12■□□□□ 0.97
RAB3IL1Q8TBN0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB3IL1Q8TBN0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.12■□□□□ 0.97
RAB3IL1Q8TBN0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB3IL1Q8TBN0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB3IL1Q8TBN0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RAB3IL1Q8TBN0 OR7E47P-201ENST00000546390 1422 ntBASIC21.12■□□□□ 0.97
RAB3IL1Q8TBN0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB3IL1Q8TBN0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB3IL1Q8TBN0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB3IL1Q8TBN0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
RAB3IL1Q8TBN0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB3IL1Q8TBN0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB3IL1Q8TBN0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
RAB3IL1Q8TBN0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.11■□□□□ 0.97
RAB3IL1Q8TBN0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB3IL1Q8TBN0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB3IL1Q8TBN0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB3IL1Q8TBN0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAB3IL1Q8TBN0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB3IL1Q8TBN0 KRT8P33-201ENST00000508125 1423 ntBASIC21.11■□□□□ 0.97
RAB3IL1Q8TBN0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RAB3IL1Q8TBN0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB3IL1Q8TBN0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB3IL1Q8TBN0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.11■□□□□ 0.97
RAB3IL1Q8TBN0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RAB3IL1Q8TBN0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB3IL1Q8TBN0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.1■□□□□ 0.97
RAB3IL1Q8TBN0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB3IL1Q8TBN0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAB3IL1Q8TBN0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.1■□□□□ 0.97
RAB3IL1Q8TBN0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB3IL1Q8TBN0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.1■□□□□ 0.97
RAB3IL1Q8TBN0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.1■□□□□ 0.97
RAB3IL1Q8TBN0 AL031848.2-201ENST00000607670 837 ntBASIC21.1■□□□□ 0.97
RAB3IL1Q8TBN0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.1■□□□□ 0.97
RAB3IL1Q8TBN0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
RAB3IL1Q8TBN0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RAB3IL1Q8TBN0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RAB3IL1Q8TBN0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB3IL1Q8TBN0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
RAB3IL1Q8TBN0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB3IL1Q8TBN0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAB3IL1Q8TBN0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB3IL1Q8TBN0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAB3IL1Q8TBN0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAB3IL1Q8TBN0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.09■□□□□ 0.97
RAB3IL1Q8TBN0 BX664725.1-201ENST00000438252 379 ntBASIC21.09■□□□□ 0.97
RAB3IL1Q8TBN0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.09■□□□□ 0.97
RAB3IL1Q8TBN0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.09■□□□□ 0.97
RAB3IL1Q8TBN0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB3IL1Q8TBN0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAB3IL1Q8TBN0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAB3IL1Q8TBN0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.09■□□□□ 0.97
RAB3IL1Q8TBN0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RAB3IL1Q8TBN0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAB3IL1Q8TBN0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.08■□□□□ 0.97
RAB3IL1Q8TBN0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RAB3IL1Q8TBN0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.08■□□□□ 0.97
RAB3IL1Q8TBN0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.08■□□□□ 0.97
RAB3IL1Q8TBN0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAB3IL1Q8TBN0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAB3IL1Q8TBN0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAB3IL1Q8TBN0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAB3IL1Q8TBN0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
RAB3IL1Q8TBN0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RAB3IL1Q8TBN0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
RAB3IL1Q8TBN0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAB3IL1Q8TBN0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAB3IL1Q8TBN0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAB3IL1Q8TBN0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RAB3IL1Q8TBN0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
RAB3IL1Q8TBN0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAB3IL1Q8TBN0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAB3IL1Q8TBN0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAB3IL1Q8TBN0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAB3IL1Q8TBN0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAB3IL1Q8TBN0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAB3IL1Q8TBN0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.07■□□□□ 0.96
RAB3IL1Q8TBN0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.07■□□□□ 0.96
RAB3IL1Q8TBN0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAB3IL1Q8TBN0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAB3IL1Q8TBN0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.06■□□□□ 0.96
RAB3IL1Q8TBN0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAB3IL1Q8TBN0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAB3IL1Q8TBN0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms