Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VPS37AQ8NEZ2 AP004607.7-201ENST00000527152 1677 ntBASIC20.22■□□□□ 0.83
VPS37AQ8NEZ2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VPS37AQ8NEZ2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
VPS37AQ8NEZ2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.21■□□□□ 0.83
VPS37AQ8NEZ2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VPS37AQ8NEZ2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VPS37AQ8NEZ2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VPS37AQ8NEZ2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
VPS37AQ8NEZ2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VPS37AQ8NEZ2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.21■□□□□ 0.83
VPS37AQ8NEZ2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
VPS37AQ8NEZ2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.21■□□□□ 0.83
VPS37AQ8NEZ2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.21■□□□□ 0.83
VPS37AQ8NEZ2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VPS37AQ8NEZ2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VPS37AQ8NEZ2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VPS37AQ8NEZ2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VPS37AQ8NEZ2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VPS37AQ8NEZ2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VPS37AQ8NEZ2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VPS37AQ8NEZ2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VPS37AQ8NEZ2 FEM1AP4-201ENST00000443167 1987 ntBASIC20.2■□□□□ 0.82
VPS37AQ8NEZ2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
VPS37AQ8NEZ2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VPS37AQ8NEZ2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VPS37AQ8NEZ2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VPS37AQ8NEZ2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
VPS37AQ8NEZ2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VPS37AQ8NEZ2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VPS37AQ8NEZ2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VPS37AQ8NEZ2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VPS37AQ8NEZ2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VPS37AQ8NEZ2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VPS37AQ8NEZ2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.19■□□□□ 0.82
VPS37AQ8NEZ2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VPS37AQ8NEZ2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VPS37AQ8NEZ2 SLC47A1P1-202ENST00000449666 945 ntBASIC20.19■□□□□ 0.82
VPS37AQ8NEZ2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VPS37AQ8NEZ2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VPS37AQ8NEZ2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.19■□□□□ 0.82
VPS37AQ8NEZ2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VPS37AQ8NEZ2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
VPS37AQ8NEZ2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VPS37AQ8NEZ2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.19■□□□□ 0.82
VPS37AQ8NEZ2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VPS37AQ8NEZ2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VPS37AQ8NEZ2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
VPS37AQ8NEZ2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VPS37AQ8NEZ2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.18■□□□□ 0.82
VPS37AQ8NEZ2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VPS37AQ8NEZ2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.18■□□□□ 0.82
VPS37AQ8NEZ2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VPS37AQ8NEZ2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VPS37AQ8NEZ2 AC131281.2-201ENST00000520478 145 ntBASIC20.18■□□□□ 0.82
VPS37AQ8NEZ2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VPS37AQ8NEZ2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
VPS37AQ8NEZ2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VPS37AQ8NEZ2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
VPS37AQ8NEZ2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.18■□□□□ 0.82
VPS37AQ8NEZ2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VPS37AQ8NEZ2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.18■□□□□ 0.82
VPS37AQ8NEZ2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
VPS37AQ8NEZ2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VPS37AQ8NEZ2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
VPS37AQ8NEZ2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
VPS37AQ8NEZ2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.17■□□□□ 0.82
VPS37AQ8NEZ2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VPS37AQ8NEZ2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
VPS37AQ8NEZ2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.17■□□□□ 0.82
VPS37AQ8NEZ2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VPS37AQ8NEZ2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
VPS37AQ8NEZ2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
VPS37AQ8NEZ2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VPS37AQ8NEZ2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VPS37AQ8NEZ2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.16■□□□□ 0.82
VPS37AQ8NEZ2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
VPS37AQ8NEZ2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VPS37AQ8NEZ2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VPS37AQ8NEZ2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
VPS37AQ8NEZ2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VPS37AQ8NEZ2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.16■□□□□ 0.82
VPS37AQ8NEZ2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
VPS37AQ8NEZ2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.16■□□□□ 0.82
VPS37AQ8NEZ2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VPS37AQ8NEZ2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.16■□□□□ 0.82
VPS37AQ8NEZ2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.16■□□□□ 0.82
VPS37AQ8NEZ2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VPS37AQ8NEZ2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VPS37AQ8NEZ2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.16■□□□□ 0.82
VPS37AQ8NEZ2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VPS37AQ8NEZ2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
VPS37AQ8NEZ2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.15■□□□□ 0.82
VPS37AQ8NEZ2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.15■□□□□ 0.82
VPS37AQ8NEZ2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.15■□□□□ 0.82
VPS37AQ8NEZ2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VPS37AQ8NEZ2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VPS37AQ8NEZ2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.15■□□□□ 0.82
VPS37AQ8NEZ2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.15■□□□□ 0.82
VPS37AQ8NEZ2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms