Protein–RNA interactions for Protein: Q8N9Q2

SREK1IP1, Protein SREK1IP1, humanhuman

Predicted RBP Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1IP1Q8N9Q2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SREK1IP1Q8N9Q2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SREK1IP1Q8N9Q2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SREK1IP1Q8N9Q2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SREK1IP1Q8N9Q2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SREK1IP1Q8N9Q2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SREK1IP1Q8N9Q2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.62■□□□□ 0.41
SREK1IP1Q8N9Q2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SREK1IP1Q8N9Q2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SREK1IP1Q8N9Q2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SREK1IP1Q8N9Q2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
SREK1IP1Q8N9Q2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.61■□□□□ 0.41
SREK1IP1Q8N9Q2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SREK1IP1Q8N9Q2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SREK1IP1Q8N9Q2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SREK1IP1Q8N9Q2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SREK1IP1Q8N9Q2 HTR7P1-202ENST00000624664 4411 ntBASIC17.61■□□□□ 0.41
SREK1IP1Q8N9Q2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SREK1IP1Q8N9Q2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SREK1IP1Q8N9Q2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.61■□□□□ 0.41
SREK1IP1Q8N9Q2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SREK1IP1Q8N9Q2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SREK1IP1Q8N9Q2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.61■□□□□ 0.41
SREK1IP1Q8N9Q2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SREK1IP1Q8N9Q2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SREK1IP1Q8N9Q2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SREK1IP1Q8N9Q2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SREK1IP1Q8N9Q2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SREK1IP1Q8N9Q2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SREK1IP1Q8N9Q2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.61■□□□□ 0.41
SREK1IP1Q8N9Q2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.61■□□□□ 0.41
SREK1IP1Q8N9Q2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
SREK1IP1Q8N9Q2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SREK1IP1Q8N9Q2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SREK1IP1Q8N9Q2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SREK1IP1Q8N9Q2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.6■□□□□ 0.41
SREK1IP1Q8N9Q2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SREK1IP1Q8N9Q2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SREK1IP1Q8N9Q2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.6■□□□□ 0.41
SREK1IP1Q8N9Q2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SREK1IP1Q8N9Q2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SREK1IP1Q8N9Q2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.6■□□□□ 0.41
SREK1IP1Q8N9Q2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SREK1IP1Q8N9Q2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SREK1IP1Q8N9Q2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
SREK1IP1Q8N9Q2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.6■□□□□ 0.41
SREK1IP1Q8N9Q2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC17.6■□□□□ 0.41
SREK1IP1Q8N9Q2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SREK1IP1Q8N9Q2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.6■□□□□ 0.41
SREK1IP1Q8N9Q2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.6■□□□□ 0.41
SREK1IP1Q8N9Q2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SREK1IP1Q8N9Q2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SREK1IP1Q8N9Q2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SREK1IP1Q8N9Q2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SREK1IP1Q8N9Q2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SREK1IP1Q8N9Q2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SREK1IP1Q8N9Q2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
SREK1IP1Q8N9Q2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SREK1IP1Q8N9Q2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SREK1IP1Q8N9Q2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SREK1IP1Q8N9Q2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SREK1IP1Q8N9Q2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.59■□□□□ 0.41
SREK1IP1Q8N9Q2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SREK1IP1Q8N9Q2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SREK1IP1Q8N9Q2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SREK1IP1Q8N9Q2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SREK1IP1Q8N9Q2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.59■□□□□ 0.41
SREK1IP1Q8N9Q2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SREK1IP1Q8N9Q2 AC079630.1-202ENST00000618127 1840 ntBASIC17.58■□□□□ 0.41
SREK1IP1Q8N9Q2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SREK1IP1Q8N9Q2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SREK1IP1Q8N9Q2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
SREK1IP1Q8N9Q2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SREK1IP1Q8N9Q2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SREK1IP1Q8N9Q2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SREK1IP1Q8N9Q2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SREK1IP1Q8N9Q2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.58■□□□□ 0.4
SREK1IP1Q8N9Q2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SREK1IP1Q8N9Q2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC17.58■□□□□ 0.4
SREK1IP1Q8N9Q2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SREK1IP1Q8N9Q2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SREK1IP1Q8N9Q2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.58■□□□□ 0.4
SREK1IP1Q8N9Q2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SREK1IP1Q8N9Q2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SREK1IP1Q8N9Q2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.58■□□□□ 0.4
SREK1IP1Q8N9Q2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SREK1IP1Q8N9Q2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SREK1IP1Q8N9Q2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SREK1IP1Q8N9Q2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SREK1IP1Q8N9Q2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SREK1IP1Q8N9Q2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SREK1IP1Q8N9Q2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SREK1IP1Q8N9Q2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SREK1IP1Q8N9Q2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SREK1IP1Q8N9Q2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SREK1IP1Q8N9Q2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
SREK1IP1Q8N9Q2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
SREK1IP1Q8N9Q2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
SREK1IP1Q8N9Q2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SREK1IP1Q8N9Q2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms