Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SYNPOQ8N3V7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.68■■□□□ 1.06
SYNPOQ8N3V7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SYNPOQ8N3V7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.68■■□□□ 1.06
SYNPOQ8N3V7 AC069236.1-201ENST00000604339 616 ntBASIC21.68■■□□□ 1.06
SYNPOQ8N3V7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SYNPOQ8N3V7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SYNPOQ8N3V7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SYNPOQ8N3V7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SYNPOQ8N3V7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.68■■□□□ 1.06
SYNPOQ8N3V7 AC092068.2-201ENST00000590491 1708 ntBASIC21.68■■□□□ 1.06
SYNPOQ8N3V7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SYNPOQ8N3V7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SYNPOQ8N3V7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SYNPOQ8N3V7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.68■■□□□ 1.06
SYNPOQ8N3V7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 KRT18P29-201ENST00000397031 1267 ntBASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 AC008687.6-201ENST00000596318 630 ntBASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.67■■□□□ 1.06
SYNPOQ8N3V7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.66■■□□□ 1.06
SYNPOQ8N3V7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYNPOQ8N3V7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.66■■□□□ 1.06
SYNPOQ8N3V7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
SYNPOQ8N3V7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.66■■□□□ 1.06
SYNPOQ8N3V7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYNPOQ8N3V7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.66■■□□□ 1.06
SYNPOQ8N3V7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYNPOQ8N3V7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SYNPOQ8N3V7 AC093827.2-201ENST00000512654 315 ntBASIC21.66■■□□□ 1.06
SYNPOQ8N3V7 RNA5SP413-201ENST00000516373 109 ntBASIC21.66■■□□□ 1.06
SYNPOQ8N3V7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SYNPOQ8N3V7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.66■■□□□ 1.06
SYNPOQ8N3V7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SYNPOQ8N3V7 AC120498.10-201ENST00000621827 505 ntBASIC21.66■■□□□ 1.06
SYNPOQ8N3V7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SYNPOQ8N3V7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.66■■□□□ 1.06
SYNPOQ8N3V7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYNPOQ8N3V7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SYNPOQ8N3V7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SYNPOQ8N3V7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYNPOQ8N3V7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.65■■□□□ 1.06
SYNPOQ8N3V7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SYNPOQ8N3V7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SYNPOQ8N3V7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYNPOQ8N3V7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.65■■□□□ 1.06
SYNPOQ8N3V7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
SYNPOQ8N3V7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.65■■□□□ 1.06
SYNPOQ8N3V7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.65■■□□□ 1.06
SYNPOQ8N3V7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.65■■□□□ 1.06
SYNPOQ8N3V7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.65■■□□□ 1.06
SYNPOQ8N3V7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYNPOQ8N3V7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SYNPOQ8N3V7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
SYNPOQ8N3V7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SYNPOQ8N3V7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SYNPOQ8N3V7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SYNPOQ8N3V7 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.64■■□□□ 1.05
SYNPOQ8N3V7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SYNPOQ8N3V7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.64■■□□□ 1.05
SYNPOQ8N3V7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.64■■□□□ 1.05
SYNPOQ8N3V7 ANOS2P-203ENST00000472227 1816 ntBASIC21.64■■□□□ 1.05
SYNPOQ8N3V7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.63■■□□□ 1.05
SYNPOQ8N3V7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SYNPOQ8N3V7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYNPOQ8N3V7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SYNPOQ8N3V7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SYNPOQ8N3V7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYNPOQ8N3V7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYNPOQ8N3V7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYNPOQ8N3V7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
SYNPOQ8N3V7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYNPOQ8N3V7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SYNPOQ8N3V7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYNPOQ8N3V7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.62■■□□□ 1.05
SYNPOQ8N3V7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SYNPOQ8N3V7 AP006587.3-201ENST00000525742 1516 ntBASIC21.62■■□□□ 1.05
SYNPOQ8N3V7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.62■■□□□ 1.05
SYNPOQ8N3V7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYNPOQ8N3V7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SYNPOQ8N3V7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms