Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.83■■□□□ 1.09
SIX5Q8N196 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.83■■□□□ 1.09
SIX5Q8N196 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.83■■□□□ 1.09
SIX5Q8N196 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.83■■□□□ 1.09
SIX5Q8N196 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.83■■□□□ 1.09
SIX5Q8N196 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.83■■□□□ 1.08
SIX5Q8N196 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SIX5Q8N196 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SIX5Q8N196 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SIX5Q8N196 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SIX5Q8N196 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SIX5Q8N196 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SIX5Q8N196 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SIX5Q8N196 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.82■■□□□ 1.08
SIX5Q8N196 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.82■■□□□ 1.08
SIX5Q8N196 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.82■■□□□ 1.08
SIX5Q8N196 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.82■■□□□ 1.08
SIX5Q8N196 EEF1DP3-203ENST00000566025 782 ntBASIC21.82■■□□□ 1.08
SIX5Q8N196 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SIX5Q8N196 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SIX5Q8N196 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SIX5Q8N196 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SIX5Q8N196 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SIX5Q8N196 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SIX5Q8N196 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SIX5Q8N196 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SIX5Q8N196 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.81■■□□□ 1.08
SIX5Q8N196 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SIX5Q8N196 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.81■■□□□ 1.08
SIX5Q8N196 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.81■■□□□ 1.08
SIX5Q8N196 AC026366.1-201ENST00000488803 879 ntBASIC21.81■■□□□ 1.08
SIX5Q8N196 AC008550.1-201ENST00000511500 884 ntBASIC21.81■■□□□ 1.08
SIX5Q8N196 AC079089.2-201ENST00000531211 1277 ntBASIC21.81■■□□□ 1.08
SIX5Q8N196 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.81■■□□□ 1.08
SIX5Q8N196 AC073648.6-201ENST00000641589 218 ntBASIC21.81■■□□□ 1.08
SIX5Q8N196 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.81■■□□□ 1.08
SIX5Q8N196 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.81■■□□□ 1.08
SIX5Q8N196 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.8■■□□□ 1.08
SIX5Q8N196 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.8■■□□□ 1.08
SIX5Q8N196 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.8■■□□□ 1.08
SIX5Q8N196 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SIX5Q8N196 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.8■■□□□ 1.08
SIX5Q8N196 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.8■■□□□ 1.08
SIX5Q8N196 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.8■■□□□ 1.08
SIX5Q8N196 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.8■■□□□ 1.08
SIX5Q8N196 AC053503.5-201ENST00000601508 636 ntBASIC21.8■■□□□ 1.08
SIX5Q8N196 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SIX5Q8N196 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SIX5Q8N196 AL139125.2-201ENST00000623134 1869 ntBASIC21.79■■□□□ 1.08
SIX5Q8N196 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIX5Q8N196 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.79■■□□□ 1.08
SIX5Q8N196 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SIX5Q8N196 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SIX5Q8N196 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIX5Q8N196 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIX5Q8N196 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIX5Q8N196 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SIX5Q8N196 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SIX5Q8N196 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SIX5Q8N196 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.79■■□□□ 1.08
SIX5Q8N196 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIX5Q8N196 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SIX5Q8N196 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIX5Q8N196 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SIX5Q8N196 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SIX5Q8N196 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIX5Q8N196 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SIX5Q8N196 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SIX5Q8N196 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.78■■□□□ 1.08
SIX5Q8N196 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SIX5Q8N196 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SIX5Q8N196 UNC93B5-201ENST00000530315 699 ntBASIC21.78■■□□□ 1.08
SIX5Q8N196 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SIX5Q8N196 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SIX5Q8N196 AC010980.2-201ENST00000587099 1412 ntBASIC21.78■■□□□ 1.08
SIX5Q8N196 AC004812.2-201ENST00000611079 2094 ntBASIC21.78■■□□□ 1.08
SIX5Q8N196 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SIX5Q8N196 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
SIX5Q8N196 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SIX5Q8N196 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.77■■□□□ 1.08
SIX5Q8N196 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.77■■□□□ 1.08
SIX5Q8N196 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SIX5Q8N196 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.77■■□□□ 1.08
SIX5Q8N196 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SIX5Q8N196 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SIX5Q8N196 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SIX5Q8N196 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SIX5Q8N196 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SIX5Q8N196 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SIX5Q8N196 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SIX5Q8N196 AP003097.1-201ENST00000530657 1135 ntBASIC21.77■■□□□ 1.08
SIX5Q8N196 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.77■■□□□ 1.08
SIX5Q8N196 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.77■■□□□ 1.08
SIX5Q8N196 AC120498.10-201ENST00000621827 505 ntBASIC21.77■■□□□ 1.08
SIX5Q8N196 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SIX5Q8N196 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SIX5Q8N196 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
SIX5Q8N196 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SIX5Q8N196 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.76■■□□□ 1.07
SIX5Q8N196 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms