Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
RP1L1Q8IWN7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.25■□□□□ 0.67
RP1L1Q8IWN7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.25■□□□□ 0.67
RP1L1Q8IWN7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RP1L1Q8IWN7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RP1L1Q8IWN7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RP1L1Q8IWN7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RP1L1Q8IWN7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RP1L1Q8IWN7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RP1L1Q8IWN7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.24■□□□□ 0.67
RP1L1Q8IWN7 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.24■□□□□ 0.67
RP1L1Q8IWN7 OR10C1-204ENST00000622521 1039 ntBASIC19.24■□□□□ 0.67
RP1L1Q8IWN7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RP1L1Q8IWN7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RP1L1Q8IWN7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
RP1L1Q8IWN7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RP1L1Q8IWN7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.24■□□□□ 0.67
RP1L1Q8IWN7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RP1L1Q8IWN7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RP1L1Q8IWN7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RP1L1Q8IWN7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RP1L1Q8IWN7 AL596275.1-201ENST00000423464 877 ntBASIC19.24■□□□□ 0.67
RP1L1Q8IWN7 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.24■□□□□ 0.67
RP1L1Q8IWN7 KRT18P20-201ENST00000548986 1279 ntBASIC19.24■□□□□ 0.67
RP1L1Q8IWN7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.24■□□□□ 0.67
RP1L1Q8IWN7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RP1L1Q8IWN7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RP1L1Q8IWN7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RP1L1Q8IWN7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RP1L1Q8IWN7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RP1L1Q8IWN7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RP1L1Q8IWN7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.23■□□□□ 0.67
RP1L1Q8IWN7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RP1L1Q8IWN7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.23■□□□□ 0.67
RP1L1Q8IWN7 AL162412.1-201ENST00000567129 965 ntBASIC19.23■□□□□ 0.67
RP1L1Q8IWN7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RP1L1Q8IWN7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RP1L1Q8IWN7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RP1L1Q8IWN7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.23■□□□□ 0.67
RP1L1Q8IWN7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.23■□□□□ 0.67
RP1L1Q8IWN7 AC026366.1-201ENST00000488803 879 ntBASIC19.23■□□□□ 0.67
RP1L1Q8IWN7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.23■□□□□ 0.67
RP1L1Q8IWN7 AC091874.3-201ENST00000512672 1195 ntBASIC19.23■□□□□ 0.67
RP1L1Q8IWN7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.23■□□□□ 0.67
RP1L1Q8IWN7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RP1L1Q8IWN7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RP1L1Q8IWN7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RP1L1Q8IWN7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RP1L1Q8IWN7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RP1L1Q8IWN7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RP1L1Q8IWN7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.22■□□□□ 0.67
RP1L1Q8IWN7 UNC93B4-201ENST00000505679 747 ntBASIC19.22■□□□□ 0.67
RP1L1Q8IWN7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RP1L1Q8IWN7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RP1L1Q8IWN7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
RP1L1Q8IWN7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RP1L1Q8IWN7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RP1L1Q8IWN7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RP1L1Q8IWN7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RP1L1Q8IWN7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.22■□□□□ 0.67
RP1L1Q8IWN7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RP1L1Q8IWN7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RP1L1Q8IWN7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RP1L1Q8IWN7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RP1L1Q8IWN7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RP1L1Q8IWN7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RP1L1Q8IWN7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.21■□□□□ 0.67
RP1L1Q8IWN7 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.21■□□□□ 0.67
RP1L1Q8IWN7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RP1L1Q8IWN7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RP1L1Q8IWN7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RP1L1Q8IWN7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RP1L1Q8IWN7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RP1L1Q8IWN7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RP1L1Q8IWN7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
RP1L1Q8IWN7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RP1L1Q8IWN7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RP1L1Q8IWN7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.2■□□□□ 0.66
RP1L1Q8IWN7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RP1L1Q8IWN7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RP1L1Q8IWN7 ANOS2P-203ENST00000472227 1816 ntBASIC19.2■□□□□ 0.66
RP1L1Q8IWN7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RP1L1Q8IWN7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.2■□□□□ 0.66
RP1L1Q8IWN7 CYP2T1P-201ENST00000432607 1285 ntBASIC19.2■□□□□ 0.66
RP1L1Q8IWN7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RP1L1Q8IWN7 RARRES2P4-201ENST00000514074 484 ntBASIC19.2■□□□□ 0.66
RP1L1Q8IWN7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.2■□□□□ 0.66
RP1L1Q8IWN7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RP1L1Q8IWN7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.2■□□□□ 0.66
RP1L1Q8IWN7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RP1L1Q8IWN7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RP1L1Q8IWN7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RP1L1Q8IWN7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RP1L1Q8IWN7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.19■□□□□ 0.66
RP1L1Q8IWN7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.19■□□□□ 0.66
RP1L1Q8IWN7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RP1L1Q8IWN7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
RP1L1Q8IWN7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RP1L1Q8IWN7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.19■□□□□ 0.66
RP1L1Q8IWN7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms