Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.91■□□□□ 0.94
APLFQ8IW19 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.91■□□□□ 0.94
APLFQ8IW19 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APLFQ8IW19 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
APLFQ8IW19 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APLFQ8IW19 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APLFQ8IW19 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APLFQ8IW19 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APLFQ8IW19 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.9■□□□□ 0.94
APLFQ8IW19 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APLFQ8IW19 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
APLFQ8IW19 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
APLFQ8IW19 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APLFQ8IW19 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
APLFQ8IW19 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.9■□□□□ 0.94
APLFQ8IW19 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.9■□□□□ 0.94
APLFQ8IW19 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APLFQ8IW19 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
APLFQ8IW19 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
APLFQ8IW19 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APLFQ8IW19 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
APLFQ8IW19 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
APLFQ8IW19 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.89■□□□□ 0.93
APLFQ8IW19 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
APLFQ8IW19 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
APLFQ8IW19 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.89■□□□□ 0.93
APLFQ8IW19 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.89■□□□□ 0.93
APLFQ8IW19 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.89■□□□□ 0.93
APLFQ8IW19 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.89■□□□□ 0.93
APLFQ8IW19 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.89■□□□□ 0.93
APLFQ8IW19 AL358852.1-201ENST00000623174 1268 ntBASIC20.89■□□□□ 0.93
APLFQ8IW19 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.89■□□□□ 0.93
APLFQ8IW19 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
APLFQ8IW19 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
APLFQ8IW19 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
APLFQ8IW19 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
APLFQ8IW19 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
APLFQ8IW19 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.89■□□□□ 0.93
APLFQ8IW19 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
APLFQ8IW19 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
APLFQ8IW19 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
APLFQ8IW19 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.89■□□□□ 0.93
APLFQ8IW19 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.89■□□□□ 0.93
APLFQ8IW19 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
APLFQ8IW19 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
APLFQ8IW19 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
APLFQ8IW19 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
APLFQ8IW19 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.88■□□□□ 0.93
APLFQ8IW19 TSPY26P-201ENST00000476365 1326 ntBASIC20.88■□□□□ 0.93
APLFQ8IW19 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.88■□□□□ 0.93
APLFQ8IW19 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
APLFQ8IW19 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
APLFQ8IW19 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.88■□□□□ 0.93
APLFQ8IW19 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
APLFQ8IW19 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.88■□□□□ 0.93
APLFQ8IW19 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
APLFQ8IW19 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
APLFQ8IW19 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.88■□□□□ 0.93
APLFQ8IW19 AC022517.1-201ENST00000592429 346 ntBASIC20.88■□□□□ 0.93
APLFQ8IW19 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.88■□□□□ 0.93
APLFQ8IW19 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.88■□□□□ 0.93
APLFQ8IW19 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
APLFQ8IW19 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.88■□□□□ 0.93
APLFQ8IW19 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
APLFQ8IW19 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
APLFQ8IW19 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.88■□□□□ 0.93
APLFQ8IW19 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
APLFQ8IW19 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
APLFQ8IW19 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
APLFQ8IW19 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APLFQ8IW19 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APLFQ8IW19 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
APLFQ8IW19 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APLFQ8IW19 ALDH1A3-203ENST00000557963 1670 ntBASIC20.87■□□□□ 0.93
APLFQ8IW19 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
APLFQ8IW19 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
APLFQ8IW19 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APLFQ8IW19 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
APLFQ8IW19 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
APLFQ8IW19 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APLFQ8IW19 AC027612.3-201ENST00000413684 1047 ntBASIC20.87■□□□□ 0.93
APLFQ8IW19 AC123595.1-201ENST00000440769 1046 ntBASIC20.87■□□□□ 0.93
APLFQ8IW19 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
APLFQ8IW19 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
APLFQ8IW19 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.87■□□□□ 0.93
APLFQ8IW19 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.87■□□□□ 0.93
APLFQ8IW19 RARRES2P11-201ENST00000635158 484 ntBASIC20.87■□□□□ 0.93
APLFQ8IW19 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
APLFQ8IW19 AC005229.4-201ENST00000610085 2198 ntBASIC20.87■□□□□ 0.93
APLFQ8IW19 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
APLFQ8IW19 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.87■□□□□ 0.93
APLFQ8IW19 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
APLFQ8IW19 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APLFQ8IW19 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.87■□□□□ 0.93
APLFQ8IW19 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.87■□□□□ 0.93
APLFQ8IW19 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.86■□□□□ 0.93
APLFQ8IW19 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.86■□□□□ 0.93
APLFQ8IW19 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.86■□□□□ 0.93
APLFQ8IW19 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.86■□□□□ 0.93
APLFQ8IW19 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms