Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 AC018755.3-202ENST00000596210 929 ntBASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
CROCCP3Q8IVE0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CROCCP3Q8IVE0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CROCCP3Q8IVE0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CROCCP3Q8IVE0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.24■□□□□ 0.67
CROCCP3Q8IVE0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CROCCP3Q8IVE0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.24■□□□□ 0.67
CROCCP3Q8IVE0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CROCCP3Q8IVE0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CROCCP3Q8IVE0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.24■□□□□ 0.67
CROCCP3Q8IVE0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CROCCP3Q8IVE0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CROCCP3Q8IVE0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CROCCP3Q8IVE0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.24■□□□□ 0.67
CROCCP3Q8IVE0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CROCCP3Q8IVE0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CROCCP3Q8IVE0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CROCCP3Q8IVE0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CROCCP3Q8IVE0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CROCCP3Q8IVE0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CROCCP3Q8IVE0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.23■□□□□ 0.67
CROCCP3Q8IVE0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.23■□□□□ 0.67
CROCCP3Q8IVE0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CROCCP3Q8IVE0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CROCCP3Q8IVE0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.23■□□□□ 0.67
CROCCP3Q8IVE0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CROCCP3Q8IVE0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CROCCP3Q8IVE0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.23■□□□□ 0.67
CROCCP3Q8IVE0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CROCCP3Q8IVE0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CROCCP3Q8IVE0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CROCCP3Q8IVE0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CROCCP3Q8IVE0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CROCCP3Q8IVE0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CROCCP3Q8IVE0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CROCCP3Q8IVE0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CROCCP3Q8IVE0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CROCCP3Q8IVE0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CROCCP3Q8IVE0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CROCCP3Q8IVE0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CROCCP3Q8IVE0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CROCCP3Q8IVE0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.22■□□□□ 0.67
CROCCP3Q8IVE0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.22■□□□□ 0.67
CROCCP3Q8IVE0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CROCCP3Q8IVE0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CROCCP3Q8IVE0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CROCCP3Q8IVE0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CROCCP3Q8IVE0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CROCCP3Q8IVE0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CROCCP3Q8IVE0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CROCCP3Q8IVE0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CROCCP3Q8IVE0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CROCCP3Q8IVE0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CROCCP3Q8IVE0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CROCCP3Q8IVE0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CROCCP3Q8IVE0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CROCCP3Q8IVE0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CROCCP3Q8IVE0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CROCCP3Q8IVE0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CROCCP3Q8IVE0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.21■□□□□ 0.67
CROCCP3Q8IVE0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.21■□□□□ 0.67
CROCCP3Q8IVE0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CROCCP3Q8IVE0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.21■□□□□ 0.67
CROCCP3Q8IVE0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CROCCP3Q8IVE0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.21■□□□□ 0.67
CROCCP3Q8IVE0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CROCCP3Q8IVE0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CROCCP3Q8IVE0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.21■□□□□ 0.67
CROCCP3Q8IVE0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
CROCCP3Q8IVE0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CROCCP3Q8IVE0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CROCCP3Q8IVE0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.2■□□□□ 0.66
CROCCP3Q8IVE0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.2■□□□□ 0.66
CROCCP3Q8IVE0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CROCCP3Q8IVE0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CROCCP3Q8IVE0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CROCCP3Q8IVE0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CROCCP3Q8IVE0 AC133552.2-201ENST00000619106 1032 ntBASIC19.2■□□□□ 0.66
CROCCP3Q8IVE0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms