Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3HC1Q86WB0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3HC1Q86WB0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3HC1Q86WB0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.15■□□□□ 0.98
ZC3HC1Q86WB0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3HC1Q86WB0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.15■□□□□ 0.98
ZC3HC1Q86WB0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.15■□□□□ 0.98
ZC3HC1Q86WB0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3HC1Q86WB0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.15■□□□□ 0.98
ZC3HC1Q86WB0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.15■□□□□ 0.98
ZC3HC1Q86WB0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3HC1Q86WB0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3HC1Q86WB0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3HC1Q86WB0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
ZC3HC1Q86WB0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.14■□□□□ 0.98
ZC3HC1Q86WB0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
ZC3HC1Q86WB0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ZC3HC1Q86WB0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZC3HC1Q86WB0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
ZC3HC1Q86WB0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
ZC3HC1Q86WB0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.14■□□□□ 0.97
ZC3HC1Q86WB0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.14■□□□□ 0.97
ZC3HC1Q86WB0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.14■□□□□ 0.97
ZC3HC1Q86WB0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZC3HC1Q86WB0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.97
ZC3HC1Q86WB0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.97
ZC3HC1Q86WB0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ZC3HC1Q86WB0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZC3HC1Q86WB0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZC3HC1Q86WB0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ZC3HC1Q86WB0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.13■□□□□ 0.97
ZC3HC1Q86WB0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZC3HC1Q86WB0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZC3HC1Q86WB0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZC3HC1Q86WB0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZC3HC1Q86WB0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZC3HC1Q86WB0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZC3HC1Q86WB0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZC3HC1Q86WB0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
ZC3HC1Q86WB0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
ZC3HC1Q86WB0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZC3HC1Q86WB0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZC3HC1Q86WB0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
ZC3HC1Q86WB0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZC3HC1Q86WB0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.12■□□□□ 0.97
ZC3HC1Q86WB0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.12■□□□□ 0.97
ZC3HC1Q86WB0 IGHV3-19-201ENST00000521488 291 ntBASIC21.12■□□□□ 0.97
ZC3HC1Q86WB0 AC126544.1-201ENST00000580842 1059 ntBASIC21.12■□□□□ 0.97
ZC3HC1Q86WB0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
ZC3HC1Q86WB0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZC3HC1Q86WB0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZC3HC1Q86WB0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
ZC3HC1Q86WB0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.12■□□□□ 0.97
ZC3HC1Q86WB0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZC3HC1Q86WB0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.11■□□□□ 0.97
ZC3HC1Q86WB0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZC3HC1Q86WB0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.11■□□□□ 0.97
ZC3HC1Q86WB0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZC3HC1Q86WB0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.11■□□□□ 0.97
ZC3HC1Q86WB0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZC3HC1Q86WB0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZC3HC1Q86WB0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.11■□□□□ 0.97
ZC3HC1Q86WB0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZC3HC1Q86WB0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZC3HC1Q86WB0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZC3HC1Q86WB0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZC3HC1Q86WB0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZC3HC1Q86WB0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.11■□□□□ 0.97
ZC3HC1Q86WB0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZC3HC1Q86WB0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.1■□□□□ 0.97
ZC3HC1Q86WB0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ZC3HC1Q86WB0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3HC1Q86WB0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.1■□□□□ 0.97
ZC3HC1Q86WB0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3HC1Q86WB0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.1■□□□□ 0.97
ZC3HC1Q86WB0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3HC1Q86WB0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3HC1Q86WB0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3HC1Q86WB0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.1■□□□□ 0.97
ZC3HC1Q86WB0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3HC1Q86WB0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3HC1Q86WB0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3HC1Q86WB0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3HC1Q86WB0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3HC1Q86WB0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3HC1Q86WB0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZC3HC1Q86WB0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZC3HC1Q86WB0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZC3HC1Q86WB0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZC3HC1Q86WB0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZC3HC1Q86WB0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZC3HC1Q86WB0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.09■□□□□ 0.97
ZC3HC1Q86WB0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.09■□□□□ 0.97
ZC3HC1Q86WB0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZC3HC1Q86WB0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZC3HC1Q86WB0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZC3HC1Q86WB0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZC3HC1Q86WB0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ZC3HC1Q86WB0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZC3HC1Q86WB0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms