Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.45■□□□□ 0.54
LRRTM1Q86UE6 AC092667.1-201ENST00000434301 2586 ntBASIC18.45■□□□□ 0.54
LRRTM1Q86UE6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.45■□□□□ 0.54
LRRTM1Q86UE6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRTM1Q86UE6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LRRTM1Q86UE6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRTM1Q86UE6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRTM1Q86UE6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM1Q86UE6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM1Q86UE6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM1Q86UE6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRTM1Q86UE6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM1Q86UE6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM1Q86UE6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRTM1Q86UE6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM1Q86UE6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM1Q86UE6 AC068587.7-201ENST00000641602 218 ntBASIC18.44■□□□□ 0.54
LRRTM1Q86UE6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM1Q86UE6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM1Q86UE6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM1Q86UE6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM1Q86UE6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM1Q86UE6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM1Q86UE6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRTM1Q86UE6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM1Q86UE6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.44■□□□□ 0.54
LRRTM1Q86UE6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM1Q86UE6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM1Q86UE6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM1Q86UE6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRTM1Q86UE6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRTM1Q86UE6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRTM1Q86UE6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.43■□□□□ 0.54
LRRTM1Q86UE6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRTM1Q86UE6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRTM1Q86UE6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRTM1Q86UE6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
LRRTM1Q86UE6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRTM1Q86UE6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LRRTM1Q86UE6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM1Q86UE6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM1Q86UE6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM1Q86UE6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM1Q86UE6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM1Q86UE6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM1Q86UE6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM1Q86UE6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM1Q86UE6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM1Q86UE6 TSPY9P-201ENST00000440215 945 ntBASIC18.42■□□□□ 0.54
LRRTM1Q86UE6 TSPY11P-201ENST00000442607 1045 ntBASIC18.42■□□□□ 0.54
LRRTM1Q86UE6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.42■□□□□ 0.54
LRRTM1Q86UE6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.42■□□□□ 0.54
LRRTM1Q86UE6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM1Q86UE6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.42■□□□□ 0.54
LRRTM1Q86UE6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM1Q86UE6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
LRRTM1Q86UE6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM1Q86UE6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM1Q86UE6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM1Q86UE6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRTM1Q86UE6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM1Q86UE6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM1Q86UE6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.41■□□□□ 0.54
LRRTM1Q86UE6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.41■□□□□ 0.54
LRRTM1Q86UE6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM1Q86UE6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM1Q86UE6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM1Q86UE6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM1Q86UE6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LRRTM1Q86UE6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM1Q86UE6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
LRRTM1Q86UE6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM1Q86UE6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM1Q86UE6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM1Q86UE6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM1Q86UE6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
LRRTM1Q86UE6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRTM1Q86UE6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.41■□□□□ 0.54
LRRTM1Q86UE6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
LRRTM1Q86UE6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
LRRTM1Q86UE6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
LRRTM1Q86UE6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
LRRTM1Q86UE6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM1Q86UE6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LRRTM1Q86UE6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM1Q86UE6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM1Q86UE6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM1Q86UE6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM1Q86UE6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRTM1Q86UE6 AC239859.2-201ENST00000444165 318 ntBASIC18.4■□□□□ 0.54
LRRTM1Q86UE6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM1Q86UE6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM1Q86UE6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM1Q86UE6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM1Q86UE6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
LRRTM1Q86UE6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM1Q86UE6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LRRTM1Q86UE6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRTM1Q86UE6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRRTM1Q86UE6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms