Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CROCCP2Q86T23 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.59■■□□□ 1.05
CROCCP2Q86T23 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CROCCP2Q86T23 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.59■■□□□ 1.05
CROCCP2Q86T23 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CROCCP2Q86T23 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CROCCP2Q86T23 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CROCCP2Q86T23 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CROCCP2Q86T23 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CROCCP2Q86T23 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CROCCP2Q86T23 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CROCCP2Q86T23 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CROCCP2Q86T23 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.58■■□□□ 1.05
CROCCP2Q86T23 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CROCCP2Q86T23 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
CROCCP2Q86T23 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
CROCCP2Q86T23 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.58■■□□□ 1.05
CROCCP2Q86T23 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.58■■□□□ 1.05
CROCCP2Q86T23 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
CROCCP2Q86T23 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CROCCP2Q86T23 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CROCCP2Q86T23 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CROCCP2Q86T23 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CROCCP2Q86T23 MIR4508-201ENST00000584178 70 ntBASIC21.57■■□□□ 1.04
CROCCP2Q86T23 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CROCCP2Q86T23 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.57■■□□□ 1.04
CROCCP2Q86T23 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CROCCP2Q86T23 AC009102.2-201ENST00000606772 1639 ntBASIC21.57■■□□□ 1.04
CROCCP2Q86T23 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CROCCP2Q86T23 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CROCCP2Q86T23 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.57■■□□□ 1.04
CROCCP2Q86T23 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.57■■□□□ 1.04
CROCCP2Q86T23 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CROCCP2Q86T23 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CROCCP2Q86T23 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CROCCP2Q86T23 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CROCCP2Q86T23 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
CROCCP2Q86T23 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.56■■□□□ 1.04
CROCCP2Q86T23 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.56■■□□□ 1.04
CROCCP2Q86T23 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.56■■□□□ 1.04
CROCCP2Q86T23 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CROCCP2Q86T23 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.56■■□□□ 1.04
CROCCP2Q86T23 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CROCCP2Q86T23 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CROCCP2Q86T23 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CROCCP2Q86T23 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.55■■□□□ 1.04
CROCCP2Q86T23 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.55■■□□□ 1.04
CROCCP2Q86T23 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.55■■□□□ 1.04
CROCCP2Q86T23 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.55■■□□□ 1.04
CROCCP2Q86T23 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CROCCP2Q86T23 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CROCCP2Q86T23 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CROCCP2Q86T23 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CROCCP2Q86T23 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CROCCP2Q86T23 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.55■■□□□ 1.04
CROCCP2Q86T23 AC007952.6-201ENST00000573168 2673 ntBASIC21.54■■□□□ 1.04
CROCCP2Q86T23 AC003957.1-201ENST00000625108 2673 ntBASIC21.54■■□□□ 1.04
CROCCP2Q86T23 AP005212.1-201ENST00000581547 1997 ntBASIC21.54■■□□□ 1.04
CROCCP2Q86T23 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CROCCP2Q86T23 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.54■■□□□ 1.04
CROCCP2Q86T23 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CROCCP2Q86T23 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.54■■□□□ 1.04
CROCCP2Q86T23 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.54■■□□□ 1.04
CROCCP2Q86T23 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CROCCP2Q86T23 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CROCCP2Q86T23 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CROCCP2Q86T23 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CROCCP2Q86T23 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CROCCP2Q86T23 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CROCCP2Q86T23 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CROCCP2Q86T23 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CROCCP2Q86T23 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.53■■□□□ 1.04
CROCCP2Q86T23 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CROCCP2Q86T23 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.53■■□□□ 1.04
CROCCP2Q86T23 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CROCCP2Q86T23 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CROCCP2Q86T23 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CROCCP2Q86T23 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.53■■□□□ 1.04
CROCCP2Q86T23 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CROCCP2Q86T23 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.53■■□□□ 1.04
CROCCP2Q86T23 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CROCCP2Q86T23 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CROCCP2Q86T23 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CROCCP2Q86T23 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CROCCP2Q86T23 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CROCCP2Q86T23 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CROCCP2Q86T23 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.52■■□□□ 1.04
CROCCP2Q86T23 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CROCCP2Q86T23 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CROCCP2Q86T23 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CROCCP2Q86T23 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.52■■□□□ 1.04
CROCCP2Q86T23 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.52■■□□□ 1.04
CROCCP2Q86T23 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CROCCP2Q86T23 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CROCCP2Q86T23 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.52■■□□□ 1.04
CROCCP2Q86T23 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CROCCP2Q86T23 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CROCCP2Q86T23 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CROCCP2Q86T23 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CROCCP2Q86T23 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms