Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBA1AQ71U36 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBA1AQ71U36 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.5■□□□□ 0.71
TUBA1AQ71U36 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.5■□□□□ 0.71
TUBA1AQ71U36 PBX2P1-201ENST00000493219 1291 ntBASIC19.5■□□□□ 0.71
TUBA1AQ71U36 AC092171.4-201ENST00000609130 632 ntBASIC19.5■□□□□ 0.71
TUBA1AQ71U36 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBA1AQ71U36 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TUBA1AQ71U36 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBA1AQ71U36 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBA1AQ71U36 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBA1AQ71U36 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
TUBA1AQ71U36 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBA1AQ71U36 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBA1AQ71U36 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TUBA1AQ71U36 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.49■□□□□ 0.71
TUBA1AQ71U36 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TUBA1AQ71U36 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TUBA1AQ71U36 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.49■□□□□ 0.71
TUBA1AQ71U36 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TUBA1AQ71U36 AC024257.2-201ENST00000549699 147 ntBASIC19.49■□□□□ 0.71
TUBA1AQ71U36 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.49■□□□□ 0.71
TUBA1AQ71U36 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.49■□□□□ 0.71
TUBA1AQ71U36 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBA1AQ71U36 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBA1AQ71U36 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBA1AQ71U36 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TUBA1AQ71U36 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBA1AQ71U36 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBA1AQ71U36 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBA1AQ71U36 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBA1AQ71U36 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.48■□□□□ 0.71
TUBA1AQ71U36 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.48■□□□□ 0.71
TUBA1AQ71U36 FP325331.1-202ENST00000623531 1380 ntBASIC19.48■□□□□ 0.71
TUBA1AQ71U36 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBA1AQ71U36 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.48■□□□□ 0.71
TUBA1AQ71U36 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.48■□□□□ 0.71
TUBA1AQ71U36 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TUBA1AQ71U36 MIR3181-201ENST00000578512 73 ntBASIC19.48■□□□□ 0.71
TUBA1AQ71U36 AL139246.5-201ENST00000606645 996 ntBASIC19.48■□□□□ 0.71
TUBA1AQ71U36 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBA1AQ71U36 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBA1AQ71U36 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TUBA1AQ71U36 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.48■□□□□ 0.71
TUBA1AQ71U36 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.48■□□□□ 0.71
TUBA1AQ71U36 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBA1AQ71U36 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
TUBA1AQ71U36 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.47■□□□□ 0.71
TUBA1AQ71U36 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TUBA1AQ71U36 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TUBA1AQ71U36 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TUBA1AQ71U36 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TUBA1AQ71U36 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TUBA1AQ71U36 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TUBA1AQ71U36 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.47■□□□□ 0.71
TUBA1AQ71U36 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TUBA1AQ71U36 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TUBA1AQ71U36 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.47■□□□□ 0.71
TUBA1AQ71U36 DUX4L19-201ENST00000557448 1267 ntBASIC19.47■□□□□ 0.71
TUBA1AQ71U36 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TUBA1AQ71U36 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.47■□□□□ 0.71
TUBA1AQ71U36 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.47■□□□□ 0.71
TUBA1AQ71U36 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.47■□□□□ 0.71
TUBA1AQ71U36 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TUBA1AQ71U36 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TUBA1AQ71U36 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TUBA1AQ71U36 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TUBA1AQ71U36 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TUBA1AQ71U36 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TUBA1AQ71U36 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TUBA1AQ71U36 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TUBA1AQ71U36 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TUBA1AQ71U36 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.46■□□□□ 0.71
TUBA1AQ71U36 DUX4L4-201ENST00000566884 1269 ntBASIC19.46■□□□□ 0.71
TUBA1AQ71U36 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.46■□□□□ 0.71
TUBA1AQ71U36 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.46■□□□□ 0.71
TUBA1AQ71U36 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TUBA1AQ71U36 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TUBA1AQ71U36 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.46■□□□□ 0.71
TUBA1AQ71U36 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TUBA1AQ71U36 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TUBA1AQ71U36 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
TUBA1AQ71U36 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.46■□□□□ 0.71
TUBA1AQ71U36 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TUBA1AQ71U36 AC135279.3-201ENST00000610945 1311 ntBASIC19.46■□□□□ 0.71
TUBA1AQ71U36 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TUBA1AQ71U36 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TUBA1AQ71U36 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TUBA1AQ71U36 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBA1AQ71U36 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TUBA1AQ71U36 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBA1AQ71U36 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBA1AQ71U36 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBA1AQ71U36 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.45■□□□□ 0.7
TUBA1AQ71U36 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBA1AQ71U36 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBA1AQ71U36 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TUBA1AQ71U36 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TUBA1AQ71U36 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.45■□□□□ 0.7
TUBA1AQ71U36 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms