Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDHR3Q6ZTQ4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CDHR3Q6ZTQ4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.34■■□□□ 1.01
CDHR3Q6ZTQ4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CDHR3Q6ZTQ4 MIR935-201ENST00000401179 91 ntBASIC21.34■■□□□ 1.01
CDHR3Q6ZTQ4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
CDHR3Q6ZTQ4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDHR3Q6ZTQ4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDHR3Q6ZTQ4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.34■■□□□ 1.01
CDHR3Q6ZTQ4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.34■■□□□ 1.01
CDHR3Q6ZTQ4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.34■■□□□ 1.01
CDHR3Q6ZTQ4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDHR3Q6ZTQ4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDHR3Q6ZTQ4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CDHR3Q6ZTQ4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDHR3Q6ZTQ4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDHR3Q6ZTQ4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
CDHR3Q6ZTQ4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDHR3Q6ZTQ4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDHR3Q6ZTQ4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.33■■□□□ 1.01
CDHR3Q6ZTQ4 AC105265.2-201ENST00000467189 838 ntBASIC21.33■■□□□ 1.01
CDHR3Q6ZTQ4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.33■■□□□ 1.01
CDHR3Q6ZTQ4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.33■■□□□ 1
CDHR3Q6ZTQ4 AC133637.1-201ENST00000624115 1537 ntBASIC21.33■■□□□ 1
CDHR3Q6ZTQ4 RASA4CP-201ENST00000424092 1398 ntBASIC21.33■■□□□ 1
CDHR3Q6ZTQ4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.33■■□□□ 1
CDHR3Q6ZTQ4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.33■■□□□ 1
CDHR3Q6ZTQ4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.33■■□□□ 1
CDHR3Q6ZTQ4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.33■■□□□ 1
CDHR3Q6ZTQ4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CDHR3Q6ZTQ4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CDHR3Q6ZTQ4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.33■■□□□ 1
CDHR3Q6ZTQ4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.32■■□□□ 1
CDHR3Q6ZTQ4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDHR3Q6ZTQ4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDHR3Q6ZTQ4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CDHR3Q6ZTQ4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDHR3Q6ZTQ4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDHR3Q6ZTQ4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
CDHR3Q6ZTQ4 AC099791.1-201ENST00000416440 715 ntBASIC21.32■■□□□ 1
CDHR3Q6ZTQ4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDHR3Q6ZTQ4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CDHR3Q6ZTQ4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDHR3Q6ZTQ4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CDHR3Q6ZTQ4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDHR3Q6ZTQ4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CDHR3Q6ZTQ4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.32■■□□□ 1
CDHR3Q6ZTQ4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDHR3Q6ZTQ4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.31■■□□□ 1
CDHR3Q6ZTQ4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDHR3Q6ZTQ4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CDHR3Q6ZTQ4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CDHR3Q6ZTQ4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.31■■□□□ 1
CDHR3Q6ZTQ4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDHR3Q6ZTQ4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.31■■□□□ 1
CDHR3Q6ZTQ4 BX842568.3-201ENST00000418104 571 ntBASIC21.31■■□□□ 1
CDHR3Q6ZTQ4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.31■■□□□ 1
CDHR3Q6ZTQ4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.31■■□□□ 1
CDHR3Q6ZTQ4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.31■■□□□ 1
CDHR3Q6ZTQ4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.31■■□□□ 1
CDHR3Q6ZTQ4 AC233992.3-201ENST00000607491 485 ntBASIC21.31■■□□□ 1
CDHR3Q6ZTQ4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDHR3Q6ZTQ4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CDHR3Q6ZTQ4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.31■■□□□ 1
CDHR3Q6ZTQ4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDHR3Q6ZTQ4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
CDHR3Q6ZTQ4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.31■■□□□ 1
CDHR3Q6ZTQ4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CDHR3Q6ZTQ4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDHR3Q6ZTQ4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDHR3Q6ZTQ4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDHR3Q6ZTQ4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.3■■□□□ 1
CDHR3Q6ZTQ4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDHR3Q6ZTQ4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.3■■□□□ 1
CDHR3Q6ZTQ4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDHR3Q6ZTQ4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.3■■□□□ 1
CDHR3Q6ZTQ4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.3■■□□□ 1
CDHR3Q6ZTQ4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.3■■□□□ 1
CDHR3Q6ZTQ4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
CDHR3Q6ZTQ4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDHR3Q6ZTQ4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CDHR3Q6ZTQ4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CDHR3Q6ZTQ4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.3■■□□□ 1
CDHR3Q6ZTQ4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDHR3Q6ZTQ4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.3■■□□□ 1
CDHR3Q6ZTQ4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.3■■□□□ 1
CDHR3Q6ZTQ4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.29■■□□□ 1
CDHR3Q6ZTQ4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CDHR3Q6ZTQ4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDHR3Q6ZTQ4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDHR3Q6ZTQ4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.29■■□□□ 1
CDHR3Q6ZTQ4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDHR3Q6ZTQ4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.29■■□□□ 1
CDHR3Q6ZTQ4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CDHR3Q6ZTQ4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CDHR3Q6ZTQ4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDHR3Q6ZTQ4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDHR3Q6ZTQ4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.29■■□□□ 1
CDHR3Q6ZTQ4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDHR3Q6ZTQ4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms