Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF111Q6ZNA4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF111Q6ZNA4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF111Q6ZNA4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF111Q6ZNA4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF111Q6ZNA4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF111Q6ZNA4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF111Q6ZNA4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF111Q6ZNA4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF111Q6ZNA4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF111Q6ZNA4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF111Q6ZNA4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF111Q6ZNA4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF111Q6ZNA4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF111Q6ZNA4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF111Q6ZNA4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RNF111Q6ZNA4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF111Q6ZNA4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
RNF111Q6ZNA4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF111Q6ZNA4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF111Q6ZNA4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF111Q6ZNA4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF111Q6ZNA4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF111Q6ZNA4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF111Q6ZNA4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
RNF111Q6ZNA4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF111Q6ZNA4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RNF111Q6ZNA4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF111Q6ZNA4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF111Q6ZNA4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF111Q6ZNA4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF111Q6ZNA4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF111Q6ZNA4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF111Q6ZNA4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF111Q6ZNA4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF111Q6ZNA4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
RNF111Q6ZNA4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF111Q6ZNA4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF111Q6ZNA4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
RNF111Q6ZNA4 AC004687.1-201ENST00000579003 1625 ntBASIC20.58■□□□□ 0.89
RNF111Q6ZNA4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF111Q6ZNA4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF111Q6ZNA4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF111Q6ZNA4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
RNF111Q6ZNA4 MIR4767-201ENST00000582827 78 ntBASIC20.58■□□□□ 0.89
RNF111Q6ZNA4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF111Q6ZNA4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
RNF111Q6ZNA4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF111Q6ZNA4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RNF111Q6ZNA4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.58■□□□□ 0.88
RNF111Q6ZNA4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
RNF111Q6ZNA4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF111Q6ZNA4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF111Q6ZNA4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF111Q6ZNA4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF111Q6ZNA4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF111Q6ZNA4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF111Q6ZNA4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF111Q6ZNA4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF111Q6ZNA4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF111Q6ZNA4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RNF111Q6ZNA4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF111Q6ZNA4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF111Q6ZNA4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF111Q6ZNA4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF111Q6ZNA4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF111Q6ZNA4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF111Q6ZNA4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF111Q6ZNA4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF111Q6ZNA4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
RNF111Q6ZNA4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF111Q6ZNA4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF111Q6ZNA4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF111Q6ZNA4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF111Q6ZNA4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF111Q6ZNA4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RNF111Q6ZNA4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF111Q6ZNA4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF111Q6ZNA4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF111Q6ZNA4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF111Q6ZNA4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.55■□□□□ 0.88
RNF111Q6ZNA4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF111Q6ZNA4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.55■□□□□ 0.88
RNF111Q6ZNA4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF111Q6ZNA4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF111Q6ZNA4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
RNF111Q6ZNA4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF111Q6ZNA4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF111Q6ZNA4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF111Q6ZNA4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF111Q6ZNA4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF111Q6ZNA4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF111Q6ZNA4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF111Q6ZNA4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF111Q6ZNA4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RNF111Q6ZNA4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF111Q6ZNA4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RNF111Q6ZNA4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF111Q6ZNA4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF111Q6ZNA4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms