Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.68■□□□□ 0.74
H3F3CQ6NXT2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H3F3CQ6NXT2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.68■□□□□ 0.74
H3F3CQ6NXT2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
H3F3CQ6NXT2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
H3F3CQ6NXT2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
H3F3CQ6NXT2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
H3F3CQ6NXT2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
H3F3CQ6NXT2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.67■□□□□ 0.74
H3F3CQ6NXT2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.67■□□□□ 0.74
H3F3CQ6NXT2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
H3F3CQ6NXT2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
H3F3CQ6NXT2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
H3F3CQ6NXT2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
H3F3CQ6NXT2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
H3F3CQ6NXT2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
H3F3CQ6NXT2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
H3F3CQ6NXT2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
H3F3CQ6NXT2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.66■□□□□ 0.74
H3F3CQ6NXT2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.66■□□□□ 0.74
H3F3CQ6NXT2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
H3F3CQ6NXT2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
H3F3CQ6NXT2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.66■□□□□ 0.74
H3F3CQ6NXT2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.66■□□□□ 0.74
H3F3CQ6NXT2 AC127496.7-201ENST00000625110 1798 ntBASIC19.66■□□□□ 0.74
H3F3CQ6NXT2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
H3F3CQ6NXT2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
H3F3CQ6NXT2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
H3F3CQ6NXT2 CROCCP5-201ENST00000436658 830 ntBASIC19.66■□□□□ 0.74
H3F3CQ6NXT2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.66■□□□□ 0.74
H3F3CQ6NXT2 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.66■□□□□ 0.74
H3F3CQ6NXT2 DUX4L16-201ENST00000555130 1264 ntBASIC19.66■□□□□ 0.74
H3F3CQ6NXT2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.66■□□□□ 0.74
H3F3CQ6NXT2 MYCNOS-205ENST00000641950 531 ntBASIC19.66■□□□□ 0.74
H3F3CQ6NXT2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
H3F3CQ6NXT2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
H3F3CQ6NXT2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
H3F3CQ6NXT2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
H3F3CQ6NXT2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.65■□□□□ 0.74
H3F3CQ6NXT2 SLC7A5P1-201ENST00000568957 537 ntBASIC19.65■□□□□ 0.74
H3F3CQ6NXT2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.65■□□□□ 0.74
H3F3CQ6NXT2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.65■□□□□ 0.74
H3F3CQ6NXT2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
H3F3CQ6NXT2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.65■□□□□ 0.74
H3F3CQ6NXT2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
H3F3CQ6NXT2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
H3F3CQ6NXT2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
H3F3CQ6NXT2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
H3F3CQ6NXT2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.65■□□□□ 0.74
H3F3CQ6NXT2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
H3F3CQ6NXT2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
H3F3CQ6NXT2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
H3F3CQ6NXT2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.64■□□□□ 0.74
H3F3CQ6NXT2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
H3F3CQ6NXT2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.64■□□□□ 0.74
H3F3CQ6NXT2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.64■□□□□ 0.74
H3F3CQ6NXT2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
H3F3CQ6NXT2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
H3F3CQ6NXT2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.64■□□□□ 0.73
H3F3CQ6NXT2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.64■□□□□ 0.73
H3F3CQ6NXT2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.64■□□□□ 0.73
H3F3CQ6NXT2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
H3F3CQ6NXT2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
H3F3CQ6NXT2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
H3F3CQ6NXT2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
H3F3CQ6NXT2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
H3F3CQ6NXT2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
H3F3CQ6NXT2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
H3F3CQ6NXT2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
H3F3CQ6NXT2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
H3F3CQ6NXT2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.63■□□□□ 0.73
H3F3CQ6NXT2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
H3F3CQ6NXT2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
H3F3CQ6NXT2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
H3F3CQ6NXT2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
H3F3CQ6NXT2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.63■□□□□ 0.73
H3F3CQ6NXT2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.63■□□□□ 0.73
H3F3CQ6NXT2 AC231657.2-201ENST00000624556 255 ntBASIC19.63■□□□□ 0.73
H3F3CQ6NXT2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.63■□□□□ 0.73
H3F3CQ6NXT2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
H3F3CQ6NXT2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
H3F3CQ6NXT2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
H3F3CQ6NXT2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
H3F3CQ6NXT2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.62■□□□□ 0.73
H3F3CQ6NXT2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.62■□□□□ 0.73
H3F3CQ6NXT2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.62■□□□□ 0.73
H3F3CQ6NXT2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.62■□□□□ 0.73
H3F3CQ6NXT2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.62■□□□□ 0.73
H3F3CQ6NXT2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.62■□□□□ 0.73
H3F3CQ6NXT2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
H3F3CQ6NXT2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.62■□□□□ 0.73
H3F3CQ6NXT2 HLA-L-209ENST00000420110 1011 ntBASIC19.62■□□□□ 0.73
H3F3CQ6NXT2 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.62■□□□□ 0.73
H3F3CQ6NXT2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
H3F3CQ6NXT2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.62■□□□□ 0.73
H3F3CQ6NXT2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
H3F3CQ6NXT2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
H3F3CQ6NXT2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.62■□□□□ 0.73
H3F3CQ6NXT2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.62■□□□□ 0.73
H3F3CQ6NXT2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms