Protein–RNA interactions for Protein: Q6NT76

HMBOX1, Homeobox-containing protein 1, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1Q6NT76 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.06■□□□□ 0.8
HMBOX1Q6NT76 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
HMBOX1Q6NT76 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMBOX1Q6NT76 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.06■□□□□ 0.8
HMBOX1Q6NT76 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HMBOX1Q6NT76 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.06■□□□□ 0.8
HMBOX1Q6NT76 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMBOX1Q6NT76 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.06■□□□□ 0.8
HMBOX1Q6NT76 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
HMBOX1Q6NT76 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMBOX1Q6NT76 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HMBOX1Q6NT76 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMBOX1Q6NT76 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
HMBOX1Q6NT76 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.06■□□□□ 0.8
HMBOX1Q6NT76 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
HMBOX1Q6NT76 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.06■□□□□ 0.8
HMBOX1Q6NT76 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMBOX1Q6NT76 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
HMBOX1Q6NT76 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.06■□□□□ 0.8
HMBOX1Q6NT76 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.05■□□□□ 0.8
HMBOX1Q6NT76 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMBOX1Q6NT76 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMBOX1Q6NT76 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
HMBOX1Q6NT76 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMBOX1Q6NT76 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMBOX1Q6NT76 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMBOX1Q6NT76 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
HMBOX1Q6NT76 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.05■□□□□ 0.8
HMBOX1Q6NT76 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.05■□□□□ 0.8
HMBOX1Q6NT76 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.05■□□□□ 0.8
HMBOX1Q6NT76 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HMBOX1Q6NT76 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMBOX1Q6NT76 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HMBOX1Q6NT76 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.05■□□□□ 0.8
HMBOX1Q6NT76 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
HMBOX1Q6NT76 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMBOX1Q6NT76 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HMBOX1Q6NT76 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMBOX1Q6NT76 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMBOX1Q6NT76 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
HMBOX1Q6NT76 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
HMBOX1Q6NT76 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMBOX1Q6NT76 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HMBOX1Q6NT76 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMBOX1Q6NT76 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
HMBOX1Q6NT76 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.04■□□□□ 0.8
HMBOX1Q6NT76 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMBOX1Q6NT76 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMBOX1Q6NT76 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.04■□□□□ 0.8
HMBOX1Q6NT76 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMBOX1Q6NT76 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMBOX1Q6NT76 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMBOX1Q6NT76 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
HMBOX1Q6NT76 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
HMBOX1Q6NT76 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMBOX1Q6NT76 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMBOX1Q6NT76 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
HMBOX1Q6NT76 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.03■□□□□ 0.8
HMBOX1Q6NT76 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMBOX1Q6NT76 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HMBOX1Q6NT76 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.03■□□□□ 0.8
HMBOX1Q6NT76 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.03■□□□□ 0.8
HMBOX1Q6NT76 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.03■□□□□ 0.8
HMBOX1Q6NT76 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.03■□□□□ 0.8
HMBOX1Q6NT76 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.03■□□□□ 0.8
HMBOX1Q6NT76 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMBOX1Q6NT76 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMBOX1Q6NT76 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMBOX1Q6NT76 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMBOX1Q6NT76 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.03■□□□□ 0.8
HMBOX1Q6NT76 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
HMBOX1Q6NT76 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
HMBOX1Q6NT76 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.02■□□□□ 0.8
HMBOX1Q6NT76 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HMBOX1Q6NT76 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
HMBOX1Q6NT76 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.02■□□□□ 0.8
HMBOX1Q6NT76 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMBOX1Q6NT76 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HMBOX1Q6NT76 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMBOX1Q6NT76 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMBOX1Q6NT76 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.02■□□□□ 0.8
HMBOX1Q6NT76 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.02■□□□□ 0.8
HMBOX1Q6NT76 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.02■□□□□ 0.8
HMBOX1Q6NT76 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
HMBOX1Q6NT76 AL391422.3-201ENST00000603791 2761 ntBASIC20.02■□□□□ 0.8
HMBOX1Q6NT76 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HMBOX1Q6NT76 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
HMBOX1Q6NT76 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HMBOX1Q6NT76 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
HMBOX1Q6NT76 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HMBOX1Q6NT76 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMBOX1Q6NT76 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMBOX1Q6NT76 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.01■□□□□ 0.79
HMBOX1Q6NT76 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HMBOX1Q6NT76 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.01■□□□□ 0.79
HMBOX1Q6NT76 AL356740.2-201ENST00000601559 647 ntBASIC20.01■□□□□ 0.79
HMBOX1Q6NT76 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMBOX1Q6NT76 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMBOX1Q6NT76 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMBOX1Q6NT76 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms