Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LYSMD4Q5XG99 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.04■□□□□ 0.96
LYSMD4Q5XG99 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.04■□□□□ 0.96
LYSMD4Q5XG99 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.04■□□□□ 0.96
LYSMD4Q5XG99 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.04■□□□□ 0.96
LYSMD4Q5XG99 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
LYSMD4Q5XG99 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LYSMD4Q5XG99 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LYSMD4Q5XG99 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LYSMD4Q5XG99 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.03■□□□□ 0.96
LYSMD4Q5XG99 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.03■□□□□ 0.96
LYSMD4Q5XG99 GCSHP5-201ENST00000443090 522 ntBASIC21.03■□□□□ 0.96
LYSMD4Q5XG99 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
LYSMD4Q5XG99 AC091874.3-201ENST00000512672 1195 ntBASIC21.03■□□□□ 0.96
LYSMD4Q5XG99 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.03■□□□□ 0.96
LYSMD4Q5XG99 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.03■□□□□ 0.96
LYSMD4Q5XG99 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
LYSMD4Q5XG99 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LYSMD4Q5XG99 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LYSMD4Q5XG99 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LYSMD4Q5XG99 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LYSMD4Q5XG99 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LYSMD4Q5XG99 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LYSMD4Q5XG99 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LYSMD4Q5XG99 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LYSMD4Q5XG99 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LYSMD4Q5XG99 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LYSMD4Q5XG99 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.02■□□□□ 0.96
LYSMD4Q5XG99 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.02■□□□□ 0.96
LYSMD4Q5XG99 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.02■□□□□ 0.96
LYSMD4Q5XG99 AL162412.1-201ENST00000567129 965 ntBASIC21.02■□□□□ 0.96
LYSMD4Q5XG99 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LYSMD4Q5XG99 AL591742.1-201ENST00000604433 565 ntBASIC21.02■□□□□ 0.96
LYSMD4Q5XG99 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LYSMD4Q5XG99 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.02■□□□□ 0.96
LYSMD4Q5XG99 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LYSMD4Q5XG99 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LYSMD4Q5XG99 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.02■□□□□ 0.96
LYSMD4Q5XG99 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LYSMD4Q5XG99 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
LYSMD4Q5XG99 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.02■□□□□ 0.95
LYSMD4Q5XG99 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LYSMD4Q5XG99 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
LYSMD4Q5XG99 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LYSMD4Q5XG99 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LYSMD4Q5XG99 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LYSMD4Q5XG99 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.01■□□□□ 0.95
LYSMD4Q5XG99 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LYSMD4Q5XG99 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
LYSMD4Q5XG99 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.01■□□□□ 0.95
LYSMD4Q5XG99 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.01■□□□□ 0.95
LYSMD4Q5XG99 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.01■□□□□ 0.95
LYSMD4Q5XG99 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.01■□□□□ 0.95
LYSMD4Q5XG99 AC006058.3-201ENST00000606217 1069 ntBASIC21.01■□□□□ 0.95
LYSMD4Q5XG99 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
LYSMD4Q5XG99 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LYSMD4Q5XG99 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LYSMD4Q5XG99 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LYSMD4Q5XG99 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21■□□□□ 0.95
LYSMD4Q5XG99 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21■□□□□ 0.95
LYSMD4Q5XG99 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LYSMD4Q5XG99 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LYSMD4Q5XG99 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21■□□□□ 0.95
LYSMD4Q5XG99 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LYSMD4Q5XG99 KRT16P2-201ENST00000414673 1423 ntBASIC21■□□□□ 0.95
LYSMD4Q5XG99 AC010980.2-201ENST00000587099 1412 ntBASIC21■□□□□ 0.95
LYSMD4Q5XG99 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LYSMD4Q5XG99 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21■□□□□ 0.95
LYSMD4Q5XG99 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LYSMD4Q5XG99 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
LYSMD4Q5XG99 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
LYSMD4Q5XG99 RBM17P2-201ENST00000616397 1405 ntBASIC20.99■□□□□ 0.95
LYSMD4Q5XG99 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
LYSMD4Q5XG99 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LYSMD4Q5XG99 AL158047.1-201ENST00000445918 881 ntBASIC20.99■□□□□ 0.95
LYSMD4Q5XG99 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.99■□□□□ 0.95
LYSMD4Q5XG99 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.99■□□□□ 0.95
LYSMD4Q5XG99 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LYSMD4Q5XG99 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LYSMD4Q5XG99 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.99■□□□□ 0.95
LYSMD4Q5XG99 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.99■□□□□ 0.95
LYSMD4Q5XG99 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LYSMD4Q5XG99 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
LYSMD4Q5XG99 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LYSMD4Q5XG99 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
LYSMD4Q5XG99 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LYSMD4Q5XG99 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
LYSMD4Q5XG99 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
LYSMD4Q5XG99 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.98■□□□□ 0.95
LYSMD4Q5XG99 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LYSMD4Q5XG99 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.98■□□□□ 0.95
LYSMD4Q5XG99 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.98■□□□□ 0.95
LYSMD4Q5XG99 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.98■□□□□ 0.95
LYSMD4Q5XG99 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
LYSMD4Q5XG99 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LYSMD4Q5XG99 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LYSMD4Q5XG99 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LYSMD4Q5XG99 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.98■□□□□ 0.95
LYSMD4Q5XG99 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD4Q5XG99 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms