Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDKAL1Q5VV42 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDKAL1Q5VV42 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDKAL1Q5VV42 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDKAL1Q5VV42 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDKAL1Q5VV42 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDKAL1Q5VV42 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CDKAL1Q5VV42 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.33■■□□□ 1.33
CDKAL1Q5VV42 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
CDKAL1Q5VV42 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
CDKAL1Q5VV42 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CDKAL1Q5VV42 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CDKAL1Q5VV42 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CDKAL1Q5VV42 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.32■■□□□ 1.32
CDKAL1Q5VV42 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDKAL1Q5VV42 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CDKAL1Q5VV42 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDKAL1Q5VV42 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CDKAL1Q5VV42 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
CDKAL1Q5VV42 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDKAL1Q5VV42 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CDKAL1Q5VV42 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDKAL1Q5VV42 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.31■■□□□ 1.32
CDKAL1Q5VV42 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.31■■□□□ 1.32
CDKAL1Q5VV42 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
CDKAL1Q5VV42 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.31■■□□□ 1.32
CDKAL1Q5VV42 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.31■■□□□ 1.32
CDKAL1Q5VV42 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.31■■□□□ 1.32
CDKAL1Q5VV42 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CDKAL1Q5VV42 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.31■■□□□ 1.32
CDKAL1Q5VV42 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDKAL1Q5VV42 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDKAL1Q5VV42 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDKAL1Q5VV42 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CDKAL1Q5VV42 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CDKAL1Q5VV42 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDKAL1Q5VV42 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CDKAL1Q5VV42 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.3■■□□□ 1.32
CDKAL1Q5VV42 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDKAL1Q5VV42 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDKAL1Q5VV42 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDKAL1Q5VV42 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CDKAL1Q5VV42 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDKAL1Q5VV42 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDKAL1Q5VV42 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDKAL1Q5VV42 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDKAL1Q5VV42 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CDKAL1Q5VV42 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.29■■□□□ 1.32
CDKAL1Q5VV42 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.29■■□□□ 1.32
CDKAL1Q5VV42 AC133561.4-201ENST00000566112 224 ntBASIC23.29■■□□□ 1.32
CDKAL1Q5VV42 SMUG1P1-201ENST00000590640 811 ntBASIC23.29■■□□□ 1.32
CDKAL1Q5VV42 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.29■■□□□ 1.32
CDKAL1Q5VV42 LINC01521-201ENST00000504184 1943 ntBASIC23.29■■□□□ 1.32
CDKAL1Q5VV42 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDKAL1Q5VV42 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.29■■□□□ 1.32
CDKAL1Q5VV42 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDKAL1Q5VV42 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDKAL1Q5VV42 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CDKAL1Q5VV42 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDKAL1Q5VV42 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDKAL1Q5VV42 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDKAL1Q5VV42 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDKAL1Q5VV42 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDKAL1Q5VV42 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.28■■□□□ 1.32
CDKAL1Q5VV42 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.28■■□□□ 1.32
CDKAL1Q5VV42 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.28■■□□□ 1.32
CDKAL1Q5VV42 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CDKAL1Q5VV42 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
CDKAL1Q5VV42 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.28■■□□□ 1.32
CDKAL1Q5VV42 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDKAL1Q5VV42 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.28■■□□□ 1.32
CDKAL1Q5VV42 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CDKAL1Q5VV42 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDKAL1Q5VV42 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDKAL1Q5VV42 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDKAL1Q5VV42 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDKAL1Q5VV42 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDKAL1Q5VV42 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CDKAL1Q5VV42 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDKAL1Q5VV42 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.27■■□□□ 1.32
CDKAL1Q5VV42 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.27■■□□□ 1.32
CDKAL1Q5VV42 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CDKAL1Q5VV42 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.27■■□□□ 1.32
CDKAL1Q5VV42 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDKAL1Q5VV42 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDKAL1Q5VV42 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDKAL1Q5VV42 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDKAL1Q5VV42 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.27■■□□□ 1.32
CDKAL1Q5VV42 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDKAL1Q5VV42 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDKAL1Q5VV42 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDKAL1Q5VV42 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CDKAL1Q5VV42 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.26■■□□□ 1.31
CDKAL1Q5VV42 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.26■■□□□ 1.31
CDKAL1Q5VV42 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDKAL1Q5VV42 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.26■■□□□ 1.31
CDKAL1Q5VV42 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.26■■□□□ 1.31
CDKAL1Q5VV42 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDKAL1Q5VV42 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CDKAL1Q5VV42 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms