Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.81■□□□□ 0.6
HIST3H3Q16695 Z98882.1-201ENST00000622160 2253 ntBASIC18.81■□□□□ 0.6
HIST3H3Q16695 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIST3H3Q16695 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST3H3Q16695 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST3H3Q16695 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.81■□□□□ 0.6
HIST3H3Q16695 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HIST3H3Q16695 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.81■□□□□ 0.6
HIST3H3Q16695 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.81■□□□□ 0.6
HIST3H3Q16695 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.81■□□□□ 0.6
HIST3H3Q16695 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIST3H3Q16695 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.81■□□□□ 0.6
HIST3H3Q16695 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.81■□□□□ 0.6
HIST3H3Q16695 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST3H3Q16695 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.81■□□□□ 0.6
HIST3H3Q16695 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIST3H3Q16695 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST3H3Q16695 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST3H3Q16695 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
HIST3H3Q16695 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST3H3Q16695 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIST3H3Q16695 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIST3H3Q16695 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.8■□□□□ 0.6
HIST3H3Q16695 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.8■□□□□ 0.6
HIST3H3Q16695 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIST3H3Q16695 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.8■□□□□ 0.6
HIST3H3Q16695 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIST3H3Q16695 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.8■□□□□ 0.6
HIST3H3Q16695 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST3H3Q16695 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.8■□□□□ 0.6
HIST3H3Q16695 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.8■□□□□ 0.6
HIST3H3Q16695 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.8■□□□□ 0.6
HIST3H3Q16695 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST3H3Q16695 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST3H3Q16695 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HIST3H3Q16695 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.79■□□□□ 0.6
HIST3H3Q16695 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST3H3Q16695 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HIST3H3Q16695 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.79■□□□□ 0.6
HIST3H3Q16695 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HIST3H3Q16695 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST3H3Q16695 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.79■□□□□ 0.6
HIST3H3Q16695 AC027612.3-201ENST00000413684 1047 ntBASIC18.79■□□□□ 0.6
HIST3H3Q16695 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HIST3H3Q16695 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.79■□□□□ 0.6
HIST3H3Q16695 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.79■□□□□ 0.6
HIST3H3Q16695 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HIST3H3Q16695 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HIST3H3Q16695 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
HIST3H3Q16695 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST3H3Q16695 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST3H3Q16695 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HIST3H3Q16695 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.78■□□□□ 0.6
HIST3H3Q16695 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.78■□□□□ 0.6
HIST3H3Q16695 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIST3H3Q16695 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
HIST3H3Q16695 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIST3H3Q16695 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.78■□□□□ 0.6
HIST3H3Q16695 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIST3H3Q16695 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.78■□□□□ 0.6
HIST3H3Q16695 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.78■□□□□ 0.6
HIST3H3Q16695 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIST3H3Q16695 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.78■□□□□ 0.6
HIST3H3Q16695 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.78■□□□□ 0.6
HIST3H3Q16695 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.78■□□□□ 0.6
HIST3H3Q16695 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.78■□□□□ 0.6
HIST3H3Q16695 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIST3H3Q16695 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST3H3Q16695 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST3H3Q16695 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST3H3Q16695 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST3H3Q16695 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HIST3H3Q16695 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HIST3H3Q16695 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HIST3H3Q16695 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
HIST3H3Q16695 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
HIST3H3Q16695 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST3H3Q16695 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST3H3Q16695 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST3H3Q16695 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HIST3H3Q16695 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.77■□□□□ 0.6
HIST3H3Q16695 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
HIST3H3Q16695 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.77■□□□□ 0.6
HIST3H3Q16695 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.77■□□□□ 0.6
HIST3H3Q16695 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST3H3Q16695 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST3H3Q16695 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HIST3H3Q16695 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HIST3H3Q16695 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
HIST3H3Q16695 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HIST3H3Q16695 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HIST3H3Q16695 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HIST3H3Q16695 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HIST3H3Q16695 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HIST3H3Q16695 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HIST3H3Q16695 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HIST3H3Q16695 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HIST3H3Q16695 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.76■□□□□ 0.59
HIST3H3Q16695 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
HIST3H3Q16695 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms