Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CD47Q08722 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD47Q08722 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD47Q08722 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CD47Q08722 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.68■□□□□ 0.74
CD47Q08722 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.68■□□□□ 0.74
CD47Q08722 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CD47Q08722 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD47Q08722 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD47Q08722 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CD47Q08722 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.68■□□□□ 0.74
CD47Q08722 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
CD47Q08722 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
CD47Q08722 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CD47Q08722 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD47Q08722 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD47Q08722 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.68■□□□□ 0.74
CD47Q08722 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD47Q08722 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.68■□□□□ 0.74
CD47Q08722 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.68■□□□□ 0.74
CD47Q08722 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CD47Q08722 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD47Q08722 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD47Q08722 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD47Q08722 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CD47Q08722 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD47Q08722 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.67■□□□□ 0.74
CD47Q08722 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CD47Q08722 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CD47Q08722 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CD47Q08722 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CD47Q08722 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD47Q08722 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD47Q08722 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.67■□□□□ 0.74
CD47Q08722 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.67■□□□□ 0.74
CD47Q08722 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CD47Q08722 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD47Q08722 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD47Q08722 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD47Q08722 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD47Q08722 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.67■□□□□ 0.74
CD47Q08722 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CD47Q08722 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD47Q08722 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD47Q08722 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.66■□□□□ 0.74
CD47Q08722 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD47Q08722 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD47Q08722 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD47Q08722 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD47Q08722 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD47Q08722 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CD47Q08722 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CD47Q08722 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CD47Q08722 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CD47Q08722 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.66■□□□□ 0.74
CD47Q08722 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CD47Q08722 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CD47Q08722 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CD47Q08722 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD47Q08722 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD47Q08722 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD47Q08722 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.65■□□□□ 0.74
CD47Q08722 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD47Q08722 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CD47Q08722 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD47Q08722 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD47Q08722 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD47Q08722 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD47Q08722 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD47Q08722 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD47Q08722 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD47Q08722 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CD47Q08722 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD47Q08722 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.65■□□□□ 0.74
CD47Q08722 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD47Q08722 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.64■□□□□ 0.73
CD47Q08722 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD47Q08722 AL356441.2-201ENST00000443009 864 ntBASIC19.64■□□□□ 0.73
CD47Q08722 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD47Q08722 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD47Q08722 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD47Q08722 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.64■□□□□ 0.73
CD47Q08722 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CD47Q08722 AC004687.1-201ENST00000579003 1625 ntBASIC19.64■□□□□ 0.73
CD47Q08722 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.64■□□□□ 0.73
CD47Q08722 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.64■□□□□ 0.73
CD47Q08722 AC026471.6-201ENST00000622954 1905 ntBASIC19.64■□□□□ 0.73
CD47Q08722 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD47Q08722 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD47Q08722 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CD47Q08722 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD47Q08722 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD47Q08722 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD47Q08722 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD47Q08722 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD47Q08722 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.63■□□□□ 0.73
CD47Q08722 MIR3621-201ENST00000580529 85 ntBASIC19.63■□□□□ 0.73
CD47Q08722 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.63■□□□□ 0.73
CD47Q08722 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.63■□□□□ 0.73
CD47Q08722 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms