Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CROCCP5-201ENST00000436658 830 ntBASIC18.66■□□□□ 0.58
NKX6-1P78426 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.66■□□□□ 0.58
NKX6-1P78426 TPRG1LP1-201ENST00000598702 760 ntBASIC18.66■□□□□ 0.58
NKX6-1P78426 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
NKX6-1P78426 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NKX6-1P78426 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX6-1P78426 AC004854.2-201ENST00000608450 1441 ntBASIC18.66■□□□□ 0.58
NKX6-1P78426 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NKX6-1P78426 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
NKX6-1P78426 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.65■□□□□ 0.58
NKX6-1P78426 BX005040.4-201ENST00000637145 1518 ntBASIC18.65■□□□□ 0.58
NKX6-1P78426 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX6-1P78426 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NKX6-1P78426 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NKX6-1P78426 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX6-1P78426 NCF1B-203ENST00000435988 1254 ntBASIC18.65■□□□□ 0.58
NKX6-1P78426 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NKX6-1P78426 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NKX6-1P78426 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.65■□□□□ 0.58
NKX6-1P78426 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.65■□□□□ 0.58
NKX6-1P78426 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.65■□□□□ 0.58
NKX6-1P78426 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX6-1P78426 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NKX6-1P78426 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NKX6-1P78426 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NKX6-1P78426 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NKX6-1P78426 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NKX6-1P78426 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NKX6-1P78426 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.64■□□□□ 0.57
NKX6-1P78426 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.64■□□□□ 0.57
NKX6-1P78426 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NKX6-1P78426 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NKX6-1P78426 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NKX6-1P78426 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.63■□□□□ 0.57
NKX6-1P78426 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NKX6-1P78426 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NKX6-1P78426 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
NKX6-1P78426 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.63■□□□□ 0.57
NKX6-1P78426 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NKX6-1P78426 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NKX6-1P78426 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NKX6-1P78426 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NKX6-1P78426 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
NKX6-1P78426 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NKX6-1P78426 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NKX6-1P78426 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.63■□□□□ 0.57
NKX6-1P78426 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.62■□□□□ 0.57
NKX6-1P78426 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NKX6-1P78426 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
NKX6-1P78426 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NKX6-1P78426 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NKX6-1P78426 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
NKX6-1P78426 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.62■□□□□ 0.57
NKX6-1P78426 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.62■□□□□ 0.57
NKX6-1P78426 KRT18P11-201ENST00000435214 1283 ntBASIC18.62■□□□□ 0.57
NKX6-1P78426 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.62■□□□□ 0.57
NKX6-1P78426 CD99P1-205ENST00000527459 561 ntBASIC18.62■□□□□ 0.57
NKX6-1P78426 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.62■□□□□ 0.57
NKX6-1P78426 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NKX6-1P78426 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.62■□□□□ 0.57
NKX6-1P78426 AC137767.1-201ENST00000602918 1920 ntBASIC18.62■□□□□ 0.57
NKX6-1P78426 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NKX6-1P78426 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NKX6-1P78426 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.62■□□□□ 0.57
NKX6-1P78426 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NKX6-1P78426 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NKX6-1P78426 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.62■□□□□ 0.57
NKX6-1P78426 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NKX6-1P78426 C9orf163-202ENST00000624034 2573 ntBASIC18.61■□□□□ 0.57
NKX6-1P78426 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NKX6-1P78426 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.61■□□□□ 0.57
NKX6-1P78426 GPX1P1-201ENST00000388829 606 ntBASIC18.61■□□□□ 0.57
NKX6-1P78426 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.61■□□□□ 0.57
NKX6-1P78426 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.61■□□□□ 0.57
NKX6-1P78426 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.61■□□□□ 0.57
NKX6-1P78426 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.61■□□□□ 0.57
NKX6-1P78426 AC011767.1-201ENST00000617410 1153 ntBASIC18.61■□□□□ 0.57
NKX6-1P78426 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NKX6-1P78426 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NKX6-1P78426 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.61■□□□□ 0.57
NKX6-1P78426 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
NKX6-1P78426 LINC00526-201ENST00000581067 1875 ntBASIC18.6■□□□□ 0.57
NKX6-1P78426 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX6-1P78426 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.6■□□□□ 0.57
NKX6-1P78426 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NKX6-1P78426 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX6-1P78426 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.6■□□□□ 0.57
NKX6-1P78426 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.6■□□□□ 0.57
NKX6-1P78426 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.6■□□□□ 0.57
NKX6-1P78426 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX6-1P78426 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX6-1P78426 MIR663A-201ENST00000385250 93 ntBASIC18.6■□□□□ 0.57
NKX6-1P78426 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.6■□□□□ 0.57
NKX6-1P78426 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.6■□□□□ 0.57
NKX6-1P78426 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX6-1P78426 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.6■□□□□ 0.57
NKX6-1P78426 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NKX6-1P78426 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX6-1P78426 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NKX6-1P78426 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms