Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
IRX4P78413 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.02■■□□□ 1.12
IRX4P78413 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
IRX4P78413 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
IRX4P78413 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
IRX4P78413 AL024507.2-201ENST00000606070 2574 ntBASIC22.01■■□□□ 1.11
IRX4P78413 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
IRX4P78413 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
IRX4P78413 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
IRX4P78413 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
IRX4P78413 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
IRX4P78413 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
IRX4P78413 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
IRX4P78413 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.01■■□□□ 1.11
IRX4P78413 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
IRX4P78413 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.01■■□□□ 1.11
IRX4P78413 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.01■■□□□ 1.11
IRX4P78413 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
IRX4P78413 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
IRX4P78413 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
IRX4P78413 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
IRX4P78413 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
IRX4P78413 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
IRX4P78413 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22■■□□□ 1.11
IRX4P78413 AC137761.2-201ENST00000561729 223 ntBASIC22■■□□□ 1.11
IRX4P78413 AC145350.3-201ENST00000569033 163 ntBASIC22■■□□□ 1.11
IRX4P78413 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
IRX4P78413 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22■■□□□ 1.11
IRX4P78413 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
IRX4P78413 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22■■□□□ 1.11
IRX4P78413 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
IRX4P78413 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
IRX4P78413 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
IRX4P78413 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
IRX4P78413 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
IRX4P78413 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
IRX4P78413 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
IRX4P78413 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.99■■□□□ 1.11
IRX4P78413 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.99■■□□□ 1.11
IRX4P78413 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.99■■□□□ 1.11
IRX4P78413 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.99■■□□□ 1.11
IRX4P78413 AP005435.1-201ENST00000529293 1178 ntBASIC21.99■■□□□ 1.11
IRX4P78413 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
IRX4P78413 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.99■■□□□ 1.11
IRX4P78413 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.99■■□□□ 1.11
IRX4P78413 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
IRX4P78413 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
IRX4P78413 AC092053.2-201ENST00000640557 1818 ntBASIC21.99■■□□□ 1.11
IRX4P78413 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
IRX4P78413 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
IRX4P78413 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
IRX4P78413 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.98■■□□□ 1.11
IRX4P78413 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
IRX4P78413 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.98■■□□□ 1.11
IRX4P78413 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.98■■□□□ 1.11
IRX4P78413 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.98■■□□□ 1.11
IRX4P78413 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.98■■□□□ 1.11
IRX4P78413 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.98■■□□□ 1.11
IRX4P78413 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
IRX4P78413 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
IRX4P78413 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
IRX4P78413 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
IRX4P78413 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
IRX4P78413 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.98■■□□□ 1.11
IRX4P78413 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
IRX4P78413 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.97■■□□□ 1.11
IRX4P78413 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
IRX4P78413 C11orf96-202ENST00000528572 1834 ntBASIC21.97■■□□□ 1.11
IRX4P78413 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
IRX4P78413 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
IRX4P78413 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
IRX4P78413 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.97■■□□□ 1.11
IRX4P78413 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
IRX4P78413 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.97■■□□□ 1.11
IRX4P78413 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
IRX4P78413 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
IRX4P78413 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
IRX4P78413 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.97■■□□□ 1.11
IRX4P78413 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
IRX4P78413 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
IRX4P78413 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
IRX4P78413 ABHD17AP1-201ENST00000358206 933 ntBASIC21.96■■□□□ 1.11
IRX4P78413 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
IRX4P78413 AC026185.1-201ENST00000445748 174 ntBASIC21.96■■□□□ 1.11
IRX4P78413 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
IRX4P78413 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.96■■□□□ 1.11
IRX4P78413 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.96■■□□□ 1.11
IRX4P78413 AC104771.1-201ENST00000603335 964 ntBASIC21.96■■□□□ 1.11
IRX4P78413 FBXW4P1-201ENST00000426721 2239 ntBASIC21.96■■□□□ 1.11
IRX4P78413 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
IRX4P78413 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
IRX4P78413 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
IRX4P78413 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
IRX4P78413 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
IRX4P78413 AC144652.1-201ENST00000609974 1624 ntBASIC21.95■■□□□ 1.1
IRX4P78413 AC087742.1-201ENST00000575880 1738 ntBASIC21.95■■□□□ 1.1
IRX4P78413 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
IRX4P78413 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
IRX4P78413 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.95■■□□□ 1.1
IRX4P78413 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms