Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPL39P62891 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15□□□□□ -0.01
RPL39P62891 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPL39P62891 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
RPL39P62891 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RPL39P62891 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPL39P62891 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPL39P62891 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPL39P62891 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPL39P62891 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPL39P62891 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPL39P62891 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RPL39P62891 C17orf82-201ENST00000623772 1530 ntBASIC14.99□□□□□ -0.01
RPL39P62891 RNF165-205ENST00000588679 2904 ntBASIC14.99□□□□□ -0.01
RPL39P62891 CLTA-206ENST00000466396 695 ntTSL 2 BASIC14.99□□□□□ -0.01
RPL39P62891 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC14.99□□□□□ -0.01
RPL39P62891 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RPL39P62891 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC14.99□□□□□ -0.01
RPL39P62891 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPL39P62891 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPL39P62891 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.99□□□□□ -0.01
RPL39P62891 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC14.99□□□□□ -0.01
RPL39P62891 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPL39P62891 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPL39P62891 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RPL39P62891 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPL39P62891 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RPL39P62891 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC14.99□□□□□ -0.01
RPL39P62891 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPL39P62891 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
RPL39P62891 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPL39P62891 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPL39P62891 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC14.98□□□□□ -0.01
RPL39P62891 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPL39P62891 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPL39P62891 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.98□□□□□ -0.01
RPL39P62891 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RPL39P62891 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPL39P62891 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RPL39P62891 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RPL39P62891 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC14.98□□□□□ -0.01
RPL39P62891 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC14.98□□□□□ -0.01
RPL39P62891 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC14.98□□□□□ -0.01
RPL39P62891 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.98□□□□□ -0.01
RPL39P62891 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RPL39P62891 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC14.98□□□□□ -0.01
RPL39P62891 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
RPL39P62891 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPL39P62891 KRT8P33-201ENST00000508125 1423 ntBASIC14.98□□□□□ -0.01
RPL39P62891 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPL39P62891 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RPL39P62891 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPL39P62891 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPL39P62891 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RPL39P62891 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPL39P62891 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPL39P62891 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPL39P62891 OXCT2P1-201ENST00000447263 1535 ntBASIC14.97□□□□□ -0.01
RPL39P62891 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPL39P62891 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC14.97□□□□□ -0.01
RPL39P62891 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPL39P62891 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC14.97□□□□□ -0.01
RPL39P62891 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC14.97□□□□□ -0.01
RPL39P62891 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPL39P62891 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPL39P62891 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPL39P62891 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPL39P62891 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RPL39P62891 TSPY13P-201ENST00000338964 914 ntBASIC14.97□□□□□ -0.01
RPL39P62891 AC103724.3-201ENST00000564481 992 ntBASIC14.97□□□□□ -0.01
RPL39P62891 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC14.97□□□□□ -0.01
RPL39P62891 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC14.97□□□□□ -0.01
RPL39P62891 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RPL39P62891 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.97□□□□□ -0.01
RPL39P62891 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC14.97□□□□□ -0.01
RPL39P62891 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RPL39P62891 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
RPL39P62891 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
RPL39P62891 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RPL39P62891 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPL39P62891 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPL39P62891 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPL39P62891 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC14.96□□□□□ -0.01
RPL39P62891 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RPL39P62891 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPL39P62891 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPL39P62891 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPL39P62891 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPL39P62891 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC14.96□□□□□ -0.01
RPL39P62891 AC103834.1-201ENST00000520383 144 ntBASIC14.96□□□□□ -0.01
RPL39P62891 AC079089.2-201ENST00000531211 1277 ntBASIC14.96□□□□□ -0.01
RPL39P62891 TK2-216ENST00000564917 1156 ntTSL 3 BASIC14.96□□□□□ -0.01
RPL39P62891 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RPL39P62891 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RPL39P62891 PCDHAC2-203ENST00000615316 3011 ntBASIC14.96□□□□□ -0.01
RPL39P62891 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.96□□□□□ -0.01
RPL39P62891 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPL39P62891 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC14.96□□□□□ -0.01
RPL39P62891 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPL39P62891 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms