Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLDN2P57739 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.08■□□□□ 0.96
CLDN2P57739 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.08■□□□□ 0.96
CLDN2P57739 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CLDN2P57739 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLDN2P57739 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CLDN2P57739 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN2P57739 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN2P57739 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN2P57739 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CLDN2P57739 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CLDN2P57739 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN2P57739 KRT18P20-201ENST00000548986 1279 ntBASIC21.07■□□□□ 0.96
CLDN2P57739 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.07■□□□□ 0.96
CLDN2P57739 AC010536.3-201ENST00000620306 533 ntBASIC21.07■□□□□ 0.96
CLDN2P57739 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
CLDN2P57739 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN2P57739 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.07■□□□□ 0.96
CLDN2P57739 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN2P57739 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN2P57739 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN2P57739 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
CLDN2P57739 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN2P57739 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN2P57739 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN2P57739 CNN2P6-201ENST00000439038 900 ntBASIC21.06■□□□□ 0.96
CLDN2P57739 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
CLDN2P57739 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN2P57739 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN2P57739 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.06■□□□□ 0.96
CLDN2P57739 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN2P57739 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN2P57739 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN2P57739 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.06■□□□□ 0.96
CLDN2P57739 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN2P57739 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN2P57739 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN2P57739 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CLDN2P57739 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN2P57739 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.05■□□□□ 0.96
CLDN2P57739 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN2P57739 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN2P57739 AC083906.2-201ENST00000511578 360 ntBASIC21.05■□□□□ 0.96
CLDN2P57739 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN2P57739 AL121832.2-201ENST00000610979 668 ntBASIC21.05■□□□□ 0.96
CLDN2P57739 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CLDN2P57739 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.05■□□□□ 0.96
CLDN2P57739 AC080038.3-201ENST00000623346 1952 ntBASIC21.05■□□□□ 0.96
CLDN2P57739 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN2P57739 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN2P57739 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN2P57739 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.04■□□□□ 0.96
CLDN2P57739 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.04■□□□□ 0.96
CLDN2P57739 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.04■□□□□ 0.96
CLDN2P57739 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.04■□□□□ 0.96
CLDN2P57739 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.04■□□□□ 0.96
CLDN2P57739 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.04■□□□□ 0.96
CLDN2P57739 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.04■□□□□ 0.96
CLDN2P57739 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.04■□□□□ 0.96
CLDN2P57739 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN2P57739 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN2P57739 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN2P57739 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CLDN2P57739 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CLDN2P57739 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN2P57739 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.03■□□□□ 0.96
CLDN2P57739 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN2P57739 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.03■□□□□ 0.96
CLDN2P57739 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.03■□□□□ 0.96
CLDN2P57739 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CLDN2P57739 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN2P57739 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.03■□□□□ 0.96
CLDN2P57739 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CLDN2P57739 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.03■□□□□ 0.96
CLDN2P57739 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN2P57739 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN2P57739 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN2P57739 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN2P57739 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN2P57739 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.02■□□□□ 0.96
CLDN2P57739 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.02■□□□□ 0.96
CLDN2P57739 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.02■□□□□ 0.96
CLDN2P57739 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN2P57739 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.02■□□□□ 0.96
CLDN2P57739 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CLDN2P57739 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.02■□□□□ 0.95
CLDN2P57739 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CLDN2P57739 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.02■□□□□ 0.95
CLDN2P57739 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN2P57739 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.01■□□□□ 0.95
CLDN2P57739 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN2P57739 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN2P57739 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN2P57739 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.01■□□□□ 0.95
CLDN2P57739 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.01■□□□□ 0.95
CLDN2P57739 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.01■□□□□ 0.95
CLDN2P57739 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.01■□□□□ 0.95
CLDN2P57739 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN2P57739 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN2P57739 AC133561.1-201ENST00000568600 2415 ntBASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms