Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB38P57729 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
RAB38P57729 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB38P57729 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.04■□□□□ 0.8
RAB38P57729 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.04■□□□□ 0.8
RAB38P57729 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RAB38P57729 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RAB38P57729 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB38P57729 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.04■□□□□ 0.8
RAB38P57729 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.04■□□□□ 0.8
RAB38P57729 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB38P57729 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB38P57729 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB38P57729 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB38P57729 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.03■□□□□ 0.8
RAB38P57729 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB38P57729 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.03■□□□□ 0.8
RAB38P57729 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.03■□□□□ 0.8
RAB38P57729 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB38P57729 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB38P57729 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB38P57729 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.03■□□□□ 0.8
RAB38P57729 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB38P57729 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB38P57729 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB38P57729 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB38P57729 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.02■□□□□ 0.8
RAB38P57729 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB38P57729 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB38P57729 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB38P57729 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB38P57729 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAB38P57729 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.02■□□□□ 0.8
RAB38P57729 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.02■□□□□ 0.8
RAB38P57729 EEF1DP3-203ENST00000566025 782 ntBASIC20.02■□□□□ 0.8
RAB38P57729 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.02■□□□□ 0.8
RAB38P57729 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RAB38P57729 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAB38P57729 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.02■□□□□ 0.8
RAB38P57729 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
RAB38P57729 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.02■□□□□ 0.8
RAB38P57729 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB38P57729 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RAB38P57729 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RAB38P57729 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RAB38P57729 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RAB38P57729 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RAB38P57729 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.01■□□□□ 0.79
RAB38P57729 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
RAB38P57729 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB38P57729 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB38P57729 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RAB38P57729 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.01■□□□□ 0.79
RAB38P57729 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
RAB38P57729 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RAB38P57729 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.01■□□□□ 0.79
RAB38P57729 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.01■□□□□ 0.79
RAB38P57729 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.01■□□□□ 0.79
RAB38P57729 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB38P57729 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB38P57729 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB38P57729 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB38P57729 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB38P57729 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB38P57729 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB38P57729 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB38P57729 AP004607.4-201ENST00000530158 1459 ntBASIC20■□□□□ 0.79
RAB38P57729 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20■□□□□ 0.79
RAB38P57729 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB38P57729 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RAB38P57729 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB38P57729 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20■□□□□ 0.79
RAB38P57729 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20■□□□□ 0.79
RAB38P57729 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20■□□□□ 0.79
RAB38P57729 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20■□□□□ 0.79
RAB38P57729 TESC-206ENST00000541210 936 ntTSL 3 BASIC20■□□□□ 0.79
RAB38P57729 NTF6G-201ENST00000591094 616 ntBASIC20■□□□□ 0.79
RAB38P57729 AC053503.5-201ENST00000601508 636 ntBASIC20■□□□□ 0.79
RAB38P57729 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20■□□□□ 0.79
RAB38P57729 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB38P57729 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RAB38P57729 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB38P57729 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB38P57729 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB38P57729 AC004854.2-201ENST00000608450 1441 ntBASIC20■□□□□ 0.79
RAB38P57729 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
RAB38P57729 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RAB38P57729 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB38P57729 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB38P57729 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB38P57729 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB38P57729 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.99■□□□□ 0.79
RAB38P57729 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.99■□□□□ 0.79
RAB38P57729 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB38P57729 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB38P57729 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
RAB38P57729 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.99■□□□□ 0.79
RAB38P57729 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.99■□□□□ 0.79
RAB38P57729 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.99■□□□□ 0.79
RAB38P57729 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms