Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.85■□□□□ 0.13
CMC4P56277 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC15.85■□□□□ 0.13
CMC4P56277 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CMC4P56277 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CMC4P56277 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CMC4P56277 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CMC4P56277 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CMC4P56277 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CMC4P56277 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC15.85■□□□□ 0.13
CMC4P56277 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CMC4P56277 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CMC4P56277 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CMC4P56277 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CMC4P56277 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CMC4P56277 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CMC4P56277 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CMC4P56277 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CMC4P56277 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CMC4P56277 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CMC4P56277 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.84■□□□□ 0.13
CMC4P56277 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CMC4P56277 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CMC4P56277 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CMC4P56277 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CMC4P56277 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CMC4P56277 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CMC4P56277 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.84■□□□□ 0.13
CMC4P56277 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.84■□□□□ 0.13
CMC4P56277 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CMC4P56277 AC053503.5-201ENST00000601508 636 ntBASIC15.84■□□□□ 0.13
CMC4P56277 AC120498.10-201ENST00000621827 505 ntBASIC15.84■□□□□ 0.13
CMC4P56277 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC15.84■□□□□ 0.13
CMC4P56277 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
CMC4P56277 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.84■□□□□ 0.13
CMC4P56277 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC15.84■□□□□ 0.13
CMC4P56277 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CMC4P56277 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CMC4P56277 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC15.84■□□□□ 0.13
CMC4P56277 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CMC4P56277 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CMC4P56277 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CMC4P56277 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC15.83■□□□□ 0.13
CMC4P56277 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CMC4P56277 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CMC4P56277 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CMC4P56277 AC087623.3-201ENST00000607047 1098 ntBASIC15.83■□□□□ 0.12
CMC4P56277 AC008175.2-201ENST00000612840 297 ntBASIC15.83■□□□□ 0.12
CMC4P56277 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CMC4P56277 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.83■□□□□ 0.12
CMC4P56277 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CMC4P56277 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CMC4P56277 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CMC4P56277 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CMC4P56277 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMC4P56277 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CMC4P56277 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMC4P56277 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMC4P56277 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CMC4P56277 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
CMC4P56277 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC15.82■□□□□ 0.12
CMC4P56277 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.82■□□□□ 0.12
CMC4P56277 NTF6G-201ENST00000591094 616 ntBASIC15.82■□□□□ 0.12
CMC4P56277 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CMC4P56277 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CMC4P56277 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMC4P56277 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CMC4P56277 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMC4P56277 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMC4P56277 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CMC4P56277 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CMC4P56277 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMC4P56277 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMC4P56277 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CMC4P56277 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMC4P56277 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CMC4P56277 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CMC4P56277 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMC4P56277 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CMC4P56277 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CMC4P56277 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CMC4P56277 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.81■□□□□ 0.12
CMC4P56277 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.81■□□□□ 0.12
CMC4P56277 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.81■□□□□ 0.12
CMC4P56277 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMC4P56277 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMC4P56277 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CMC4P56277 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMC4P56277 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMC4P56277 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CMC4P56277 GOLGA2P6-201ENST00000340929 2049 ntBASIC15.8■□□□□ 0.12
CMC4P56277 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMC4P56277 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CMC4P56277 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CMC4P56277 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.8■□□□□ 0.12
CMC4P56277 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMC4P56277 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMC4P56277 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CMC4P56277 POU5F1P4-201ENST00000413175 1085 ntBASIC15.8■□□□□ 0.12
CMC4P56277 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.8■□□□□ 0.12
CMC4P56277 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms