Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.97■□□□□ 0.79
EFNA3P52797 EEF1DP3-203ENST00000566025 782 ntBASIC19.97■□□□□ 0.79
EFNA3P52797 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
EFNA3P52797 AC003102.1-202ENST00000563394 1796 ntBASIC19.97■□□□□ 0.79
EFNA3P52797 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
EFNA3P52797 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
EFNA3P52797 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
EFNA3P52797 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
EFNA3P52797 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
EFNA3P52797 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
EFNA3P52797 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
EFNA3P52797 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EFNA3P52797 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EFNA3P52797 RAP2CP1-201ENST00000605103 478 ntBASIC19.96■□□□□ 0.79
EFNA3P52797 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
EFNA3P52797 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
EFNA3P52797 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EFNA3P52797 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
EFNA3P52797 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EFNA3P52797 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.96■□□□□ 0.79
EFNA3P52797 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EFNA3P52797 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
EFNA3P52797 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.95■□□□□ 0.78
EFNA3P52797 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EFNA3P52797 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
EFNA3P52797 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
EFNA3P52797 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
EFNA3P52797 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
EFNA3P52797 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
EFNA3P52797 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EFNA3P52797 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
EFNA3P52797 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EFNA3P52797 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EFNA3P52797 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EFNA3P52797 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
EFNA3P52797 FAM99A-202ENST00000538190 1989 ntBASIC19.94■□□□□ 0.78
EFNA3P52797 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.94■□□□□ 0.78
EFNA3P52797 AC016769.1-201ENST00000409132 1010 ntBASIC19.94■□□□□ 0.78
EFNA3P52797 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.94■□□□□ 0.78
EFNA3P52797 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EFNA3P52797 AP001160.3-201ENST00000601484 763 ntBASIC19.94■□□□□ 0.78
EFNA3P52797 AC011767.1-201ENST00000617410 1153 ntBASIC19.94■□□□□ 0.78
EFNA3P52797 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EFNA3P52797 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EFNA3P52797 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
EFNA3P52797 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EFNA3P52797 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
EFNA3P52797 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
EFNA3P52797 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
EFNA3P52797 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.93■□□□□ 0.78
EFNA3P52797 AC242852.2-201ENST00000615738 1807 ntBASIC19.93■□□□□ 0.78
EFNA3P52797 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EFNA3P52797 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EFNA3P52797 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.93■□□□□ 0.78
EFNA3P52797 CDCA4P2-201ENST00000441182 718 ntBASIC19.93■□□□□ 0.78
EFNA3P52797 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.93■□□□□ 0.78
EFNA3P52797 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.93■□□□□ 0.78
EFNA3P52797 UBE2DNL-204ENST00000602536 740 ntBASIC19.93■□□□□ 0.78
EFNA3P52797 AC080038.1-201ENST00000611274 1154 ntBASIC19.93■□□□□ 0.78
EFNA3P52797 AC010542.4-201ENST00000563151 1910 ntBASIC19.93■□□□□ 0.78
EFNA3P52797 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EFNA3P52797 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
EFNA3P52797 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EFNA3P52797 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EFNA3P52797 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.92■□□□□ 0.78
EFNA3P52797 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
EFNA3P52797 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EFNA3P52797 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.92■□□□□ 0.78
EFNA3P52797 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
EFNA3P52797 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EFNA3P52797 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EFNA3P52797 AC010141.2-201ENST00000452426 721 ntBASIC19.92■□□□□ 0.78
EFNA3P52797 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.92■□□□□ 0.78
EFNA3P52797 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EFNA3P52797 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.92■□□□□ 0.78
EFNA3P52797 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.92■□□□□ 0.78
EFNA3P52797 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.92■□□□□ 0.78
EFNA3P52797 AC138907.5-202ENST00000569484 235 ntBASIC19.92■□□□□ 0.78
EFNA3P52797 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.92■□□□□ 0.78
EFNA3P52797 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.92■□□□□ 0.78
EFNA3P52797 AC073111.5-205ENST00000641717 521 ntBASIC19.92■□□□□ 0.78
EFNA3P52797 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
EFNA3P52797 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.92■□□□□ 0.78
EFNA3P52797 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
EFNA3P52797 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EFNA3P52797 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EFNA3P52797 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
EFNA3P52797 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
EFNA3P52797 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EFNA3P52797 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EFNA3P52797 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.91■□□□□ 0.78
EFNA3P52797 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.91■□□□□ 0.78
EFNA3P52797 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EFNA3P52797 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
EFNA3P52797 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
EFNA3P52797 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.91■□□□□ 0.78
EFNA3P52797 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.91■□□□□ 0.78
EFNA3P52797 MFSD11-216ENST00000590393 1141 ntBASIC19.91■□□□□ 0.78
EFNA3P52797 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.91■□□□□ 0.78
EFNA3P52797 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms