Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.94■□□□□ 0.94
CSNK1EP49674 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.94■□□□□ 0.94
CSNK1EP49674 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CSNK1EP49674 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.94■□□□□ 0.94
CSNK1EP49674 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.94■□□□□ 0.94
CSNK1EP49674 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.94■□□□□ 0.94
CSNK1EP49674 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CSNK1EP49674 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSNK1EP49674 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.94■□□□□ 0.94
CSNK1EP49674 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CSNK1EP49674 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSNK1EP49674 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSNK1EP49674 AC137767.1-201ENST00000602918 1920 ntBASIC20.94■□□□□ 0.94
CSNK1EP49674 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSNK1EP49674 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSNK1EP49674 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSNK1EP49674 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSNK1EP49674 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSNK1EP49674 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CSNK1EP49674 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSNK1EP49674 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.93■□□□□ 0.94
CSNK1EP49674 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CSNK1EP49674 KRT18P29-201ENST00000397031 1267 ntBASIC20.93■□□□□ 0.94
CSNK1EP49674 AL512625.2-201ENST00000417533 625 ntBASIC20.93■□□□□ 0.94
CSNK1EP49674 BX276092.2-201ENST00000417668 665 ntBASIC20.93■□□□□ 0.94
CSNK1EP49674 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.93■□□□□ 0.94
CSNK1EP49674 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.93■□□□□ 0.94
CSNK1EP49674 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSNK1EP49674 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSNK1EP49674 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSNK1EP49674 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.93■□□□□ 0.94
CSNK1EP49674 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.93■□□□□ 0.94
CSNK1EP49674 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSNK1EP49674 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSNK1EP49674 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSNK1EP49674 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CSNK1EP49674 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.92■□□□□ 0.94
CSNK1EP49674 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.92■□□□□ 0.94
CSNK1EP49674 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSNK1EP49674 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSNK1EP49674 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSNK1EP49674 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.92■□□□□ 0.94
CSNK1EP49674 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.92■□□□□ 0.94
CSNK1EP49674 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.92■□□□□ 0.94
CSNK1EP49674 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.92■□□□□ 0.94
CSNK1EP49674 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.92■□□□□ 0.94
CSNK1EP49674 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.92■□□□□ 0.94
CSNK1EP49674 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.92■□□□□ 0.94
CSNK1EP49674 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CSNK1EP49674 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSNK1EP49674 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.92■□□□□ 0.94
CSNK1EP49674 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.92■□□□□ 0.94
CSNK1EP49674 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CSNK1EP49674 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSNK1EP49674 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSNK1EP49674 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSNK1EP49674 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.91■□□□□ 0.94
CSNK1EP49674 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.91■□□□□ 0.94
CSNK1EP49674 AC092118.2-201ENST00000613495 667 ntBASIC20.91■□□□□ 0.94
CSNK1EP49674 ITM2C-210ENST00000620962 501 ntBASIC20.91■□□□□ 0.94
CSNK1EP49674 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CSNK1EP49674 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSNK1EP49674 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSNK1EP49674 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.9■□□□□ 0.94
CSNK1EP49674 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CSNK1EP49674 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.9■□□□□ 0.94
CSNK1EP49674 AC087742.1-201ENST00000575880 1738 ntBASIC20.9■□□□□ 0.94
CSNK1EP49674 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CSNK1EP49674 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.9■□□□□ 0.94
CSNK1EP49674 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.9■□□□□ 0.94
CSNK1EP49674 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.9■□□□□ 0.94
CSNK1EP49674 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CSNK1EP49674 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSNK1EP49674 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSNK1EP49674 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.9■□□□□ 0.94
CSNK1EP49674 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CSNK1EP49674 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.9■□□□□ 0.94
CSNK1EP49674 AC093827.2-201ENST00000512654 315 ntBASIC20.9■□□□□ 0.94
CSNK1EP49674 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CSNK1EP49674 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSNK1EP49674 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSNK1EP49674 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CSNK1EP49674 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CSNK1EP49674 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CSNK1EP49674 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSNK1EP49674 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSNK1EP49674 POU5F1P4-201ENST00000413175 1085 ntBASIC20.89■□□□□ 0.93
CSNK1EP49674 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.89■□□□□ 0.93
CSNK1EP49674 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.89■□□□□ 0.93
CSNK1EP49674 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CSNK1EP49674 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSNK1EP49674 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CSNK1EP49674 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK1EP49674 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK1EP49674 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK1EP49674 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.88■□□□□ 0.93
CSNK1EP49674 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.88■□□□□ 0.93
CSNK1EP49674 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK1EP49674 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK1EP49674 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms