Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SRP9P49458 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRP9P49458 LINC01521-201ENST00000504184 1943 ntBASIC18.78■□□□□ 0.6
SRP9P49458 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.78■□□□□ 0.6
SRP9P49458 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
SRP9P49458 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRP9P49458 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.77■□□□□ 0.6
SRP9P49458 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SRP9P49458 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
SRP9P49458 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRP9P49458 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.77■□□□□ 0.6
SRP9P49458 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.77■□□□□ 0.6
SRP9P49458 AC106739.1-201ENST00000617035 715 ntBASIC18.77■□□□□ 0.6
SRP9P49458 AC110285.6-201ENST00000617652 491 ntBASIC18.77■□□□□ 0.6
SRP9P49458 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SRP9P49458 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SRP9P49458 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRP9P49458 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.77■□□□□ 0.6
SRP9P49458 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRP9P49458 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SRP9P49458 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SRP9P49458 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SRP9P49458 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SRP9P49458 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
SRP9P49458 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SRP9P49458 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SRP9P49458 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SRP9P49458 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRP9P49458 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SRP9P49458 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
SRP9P49458 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRP9P49458 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRP9P49458 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
SRP9P49458 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SRP9P49458 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRP9P49458 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.76■□□□□ 0.59
SRP9P49458 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.76■□□□□ 0.59
SRP9P49458 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.76■□□□□ 0.59
SRP9P49458 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.76■□□□□ 0.59
SRP9P49458 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SRP9P49458 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRP9P49458 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRP9P49458 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRP9P49458 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SRP9P49458 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SRP9P49458 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SRP9P49458 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SRP9P49458 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.75■□□□□ 0.59
SRP9P49458 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.75■□□□□ 0.59
SRP9P49458 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SRP9P49458 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SRP9P49458 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
SRP9P49458 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SRP9P49458 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SRP9P49458 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SRP9P49458 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.74■□□□□ 0.59
SRP9P49458 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.74■□□□□ 0.59
SRP9P49458 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.74■□□□□ 0.59
SRP9P49458 AC004687.1-201ENST00000579003 1625 ntBASIC18.74■□□□□ 0.59
SRP9P49458 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRP9P49458 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRP9P49458 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.74■□□□□ 0.59
SRP9P49458 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRP9P49458 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRP9P49458 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRP9P49458 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRP9P49458 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SRP9P49458 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.74■□□□□ 0.59
SRP9P49458 AC133561.4-201ENST00000566112 224 ntBASIC18.74■□□□□ 0.59
SRP9P49458 MIR4767-201ENST00000582827 78 ntBASIC18.74■□□□□ 0.59
SRP9P49458 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.74■□□□□ 0.59
SRP9P49458 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.74■□□□□ 0.59
SRP9P49458 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRP9P49458 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRP9P49458 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SRP9P49458 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRP9P49458 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRP9P49458 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.73■□□□□ 0.59
SRP9P49458 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRP9P49458 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SRP9P49458 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.73■□□□□ 0.59
SRP9P49458 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.73■□□□□ 0.59
SRP9P49458 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
SRP9P49458 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SRP9P49458 EDA-201ENST00000338901 1233 ntBASIC18.73■□□□□ 0.59
SRP9P49458 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.73■□□□□ 0.59
SRP9P49458 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SRP9P49458 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.73■□□□□ 0.59
SRP9P49458 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRP9P49458 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SRP9P49458 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRP9P49458 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.73■□□□□ 0.59
SRP9P49458 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.73■□□□□ 0.59
SRP9P49458 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRP9P49458 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRP9P49458 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SRP9P49458 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SRP9P49458 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SRP9P49458 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRP9P49458 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms