Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	RPP1A	YDL081C	321 nt		4.19	□□□□□ -1.74
CAF16	P43569	YHR028W-A	YHR028W-A	321 nt		4.19	□□□□□ -1.74
CAF16	P43569	GPP1	YIL053W	753 nt		4.19	□□□□□ -1.74
CAF16	P43569	YAP5	YIR018W	738 nt		4.19	□□□□□ -1.74
CAF16	P43569	YJL007C	YJL007C	315 nt		4.19	□□□□□ -1.74
CAF16	P43569	MRP17	YKL003C	396 nt		4.19	□□□□□ -1.74
CAF16	P43569	YNL235C	YNL235C	432 nt		4.19	□□□□□ -1.74
CAF16	P43569	YBR230W-A	YBR230W-A	201 nt		4.19	□□□□□ -1.74
CAF16	P43569	TOG1	YER184C	2385 nt		4.19	□□□□□ -1.74
CAF16	P43569	BUD22	YMR014W	1560 nt		4.19	□□□□□ -1.74
CAF16	P43569	PSP1	YDR505C	2526 nt		4.18	□□□□□ -1.74
CAF16	P43569	DUN1	YDL101C	1542 nt		4.18	□□□□□ -1.74
CAF16	P43569	snR68	snR68	136 nt		4.18	□□□□□ -1.74
CAF16	P43569	YDR271C	YDR271C	372 nt		4.18	□□□□□ -1.74
CAF16	P43569	TAM41	YGR046W	1158 nt		4.18	□□□□□ -1.74
CAF16	P43569	SSP120	YLR250W	705 nt		4.18	□□□□□ -1.74
CAF16	P43569	RBL2	YOR265W	321 nt		4.18	□□□□□ -1.74
CAF16	P43569	YPL205C	YPL205C	345 nt		4.18	□□□□□ -1.74
CAF16	P43569	YPR174C	YPR174C	666 nt		4.18	□□□□□ -1.74
CAF16	P43569	YEH2	YLR020C	1617 nt		4.17	□□□□□ -1.74
CAF16	P43569	RPA14	YDR156W	414 nt		4.17	□□□□□ -1.74
CAF16	P43569	YDR320W-B	YDR320W-B	138 nt		4.17	□□□□□ -1.74
CAF16	P43569	YGR035W-A	YGR035W-A	222 nt		4.17	□□□□□ -1.74
CAF16	P43569	YGR153W	YGR153W	654 nt		4.17	□□□□□ -1.74
CAF16	P43569	YIR014W	YIR014W	729 nt		4.17	□□□□□ -1.74
CAF16	P43569	LOH1	YJL038C	660 nt		4.17	□□□□□ -1.74
CAF16	P43569	AIM22	YJL046W	1230 nt		4.17	□□□□□ -1.74
CAF16	P43569	YET1	YKL065C	621 nt		4.17	□□□□□ -1.74
CAF16	P43569	YLR264C-A	YLR264C-A	117 nt		4.17	□□□□□ -1.74
CAF16	P43569	NNT1	YLR285W	786 nt		4.17	□□□□□ -1.74
CAF16	P43569	RIM4	YHL024W	2142 nt		4.16	□□□□□ -1.74
CAF16	P43569	RRN7	YJL025W	1545 nt		4.16	□□□□□ -1.74
CAF16	P43569	RRN11	YML043C	1524 nt		4.16	□□□□□ -1.74
CAF16	P43569	NUP85	YJR042W	2235 nt		4.16	□□□□□ -1.74
CAF16	P43569	RPS29B	YDL061C	171 nt		4.16	□□□□□ -1.74
CAF16	P43569	FIN1	YDR130C	876 nt		4.16	□□□□□ -1.74
CAF16	P43569	EAF6	YJR082C	342 nt		4.16	□□□□□ -1.74
CAF16	P43569	PAM18	YLR008C	507 nt		4.16	□□□□□ -1.74
CAF16	P43569	CMD1	YBR109C	444 nt		4.16	□□□□□ -1.74
CAF16	P43569	REI1	YBR267W	1182 nt		4.16	□□□□□ -1.74
CAF16	P43569	YCL022C	YCL022C	516 nt		4.16	□□□□□ -1.74
CAF16	P43569	MIP6	YHR015W	1980 nt		4.16	□□□□□ -1.74
CAF16	P43569	EXO70	YJL085W	1872 nt		4.15	□□□□□ -1.74
CAF16	P43569	ASI1	YMR119W	1875 nt		4.15	□□□□□ -1.74
CAF16	P43569	MNT4	YNR059W	1743 nt		4.15	□□□□□ -1.74
CAF16	P43569	SEN1	YLR430W	6696 nt		4.15	□□□□□ -1.74
CAF16	P43569	YFL015C	YFL015C	495 nt		4.15	□□□□□ -1.75
CAF16	P43569	YGR042W	YGR042W	816 nt		4.15	□□□□□ -1.75
CAF16	P43569	UPF3	YGR072W	1164 nt		4.15	□□□□□ -1.75
CAF16	P43569	YIL068W-A	YIL068W-A	384 nt		4.15	□□□□□ -1.75
CAF16	P43569	YKL069W	YKL069W	543 nt		4.15	□□□□□ -1.75
CAF16	P43569	YMR010W	YMR010W	1218 nt		4.15	□□□□□ -1.75
CAF16	P43569	PAI3	YMR174C	207 nt		4.15	□□□□□ -1.75
CAF16	P43569	MSN1	YOL116W	1149 nt		4.15	□□□□□ -1.75
CAF16	P43569	DSS4	YPR017C	432 nt		4.15	□□□□□ -1.75
CAF16	P43569	YPR145C-A	YPR145C-A	237 nt		4.15	□□□□□ -1.75
CAF16	P43569	GDH2	YDL215C	3279 nt		4.14	□□□□□ -1.75
CAF16	P43569	TRS85	YDR108W	2097 nt		4.14	□□□□□ -1.75
CAF16	P43569	SLD5	YDR489W	885 nt		4.14	□□□□□ -1.75
CAF16	P43569	CGR1	YGL029W	363 nt		4.14	□□□□□ -1.75
CAF16	P43569	TIM10	YHR005C-A	282 nt		4.14	□□□□□ -1.75
CAF16	P43569	YIL029C	YIL029C	429 nt		4.14	□□□□□ -1.75
CAF16	P43569	RPL17B	YJL177W	555 nt		4.14	□□□□□ -1.75
CAF16	P43569	SHG1	YBR258C	429 nt		4.14	□□□□□ -1.75
CAF16	P43569	PMC1	YGL006W	3522 nt		4.14	□□□□□ -1.75
CAF16	P43569	EBS1	YDR206W	2655 nt		4.14	□□□□□ -1.75
CAF16	P43569	YGL036W	YGL036W	2730 nt		4.13	□□□□□ -1.75
CAF16	P43569	ISM1	YPL040C	3009 nt		4.13	□□□□□ -1.75
CAF16	P43569	ASI3	YNL008C	2031 nt		4.13	□□□□□ -1.75
CAF16	P43569	RHB1	YCR027C	630 nt		4.13	□□□□□ -1.75
CAF16	P43569	YEL053W-A	YEL053W-A	348 nt		4.13	□□□□□ -1.75
CAF16	P43569	THI5	YFL058W	1023 nt		4.13	□□□□□ -1.75
CAF16	P43569	SDL1	YIL167W	633 nt		4.13	□□□□□ -1.75
CAF16	P43569	ISA1	YLL027W	753 nt		4.13	□□□□□ -1.75
CAF16	P43569	FYV7	YLR068W	456 nt		4.13	□□□□□ -1.75
CAF16	P43569	ATP18	YML081C-A	180 nt		4.13	□□□□□ -1.75
CAF16	P43569	UBX4	YMR067C	1251 nt		4.13	□□□□□ -1.75
CAF16	P43569	THI12	YNL332W	1023 nt		4.13	□□□□□ -1.75
CAF16	P43569	XKS1	YGR194C	1803 nt		4.13	□□□□□ -1.75
CAF16	P43569	NUP133	YKR082W	3474 nt		4.13	□□□□□ -1.75
CAF16	P43569	AFR1	YDR085C	1863 nt		4.13	□□□□□ -1.75
CAF16	P43569	VPS9	YML097C	1356 nt		4.13	□□□□□ -1.75
CAF16	P43569	RAD1	YPL022W	3303 nt		4.13	□□□□□ -1.75
CAF16	P43569	NDC80	YIL144W	2076 nt		4.12	□□□□□ -1.75
CAF16	P43569	SPR3	YGR059W	1539 nt		4.12	□□□□□ -1.75
CAF16	P43569	HLR1	YDR528W	1272 nt		4.12	□□□□□ -1.75
CAF16	P43569	RPN12	YFR052W	825 nt		4.12	□□□□□ -1.75
CAF16	P43569	SAE2	YGL175C	1038 nt		4.12	□□□□□ -1.75
CAF16	P43569	COX4	YGL187C	468 nt		4.12	□□□□□ -1.75
CAF16	P43569	YJL119C	YJL119C	324 nt		4.12	□□□□□ -1.75
CAF16	P43569	BUD21	YOR078W	645 nt		4.12	□□□□□ -1.75
CAF16	P43569	RSA1	YPL193W	1146 nt		4.12	□□□□□ -1.75
CAF16	P43569	YNL284C-A	YNL284C-A	1323 nt		4.12	□□□□□ -1.75
CAF16	P43569	PIN4	YBL051C	2007 nt		4.12	□□□□□ -1.75
CAF16	P43569	KRE29	YER038C	1395 nt		4.12	□□□□□ -1.75
CAF16	P43569	CBF5	YLR175W	1452 nt		4.11	□□□□□ -1.75
CAF16	P43569	SYO1	YDL063C	1863 nt		4.11	□□□□□ -1.75
CAF16	P43569	NEL1	YHR035W	1893 nt		4.11	□□□□□ -1.75
CAF16	P43569	YDL187C	YDL187C	330 nt		4.11	□□□□□ -1.75
CAF16	P43569	FAR7	YFR008W	666 nt		4.11	□□□□□ -1.75

Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms